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TranscriptomicsECBiG PlasTi-microarray CSH validation
Experiment evaluating aplicability of PlasTi-microarray for cross-species hybridization studies. PlasTi-microarray is a tiling oligonucleotide microarray originally designed for cucumber plastome analysis.Chloroplast RNA from Arabidopsis, tomato and spinach leaves was extracted, labelled and hybrid...
ORGANISM(S): Lycopersicon esculentum 
2011-05-27 | E-MEXP-3220 | biostudies-arrayexpress
TranscriptomicsTobacco By2 cells early response to Nacl treatment
Time-course analysis of gene expression changes in tobacco By2 cells in response to 250 mM Nacl after 30 min or 90 min treatment, measured with heterologus TOM1 (tomato) cDNA microarrays
ORGANISM(S): Nicotiana tabacum 
2013-08-31 | E-MEXP-3939 | biostudies-arrayexpress
TranscriptomicsA gene expression microarray for Nicotiana benthamiana based on de novo transcriptome sequence assembly
Gene expression microarray was designed, based on two recently published versions of the N. benthamiana transcriptome (v.3 and v.5). Based on homology searches and hybridization tests we identified the sense strand in 106,684 transcriptome contigs and used this information to design a Nb-105k microa...
ORGANISM(S): Nicotiana benthamiana 
2016-01-08 | E-GEOD-76631 | biostudies-arrayexpress
TranscriptomicsBarely leaf dark-induced senescence
Time-course transcriptional profiling of senescing barley leaves. In this model, the senescence process was induced by continued incubation of the seedlings in darkness. Plant samples for the expression analysis were collected before senescence induction (Day 0) and after 3,7 and 10 days of incubati...
ORGANISM(S): Hordeum vulgare 
2014-10-22 | E-GEOD-62539 | biostudies-arrayexpress
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