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TranscriptomicsTranscriptional profiling of Piriformospora indica colonizing living and dead barley roots
Recent sequencing projects have provided deep insight into fungal lifestyle-associated genomic adaptations. Here we report on the 25 Mb genome of the mutualistic root symbiont Piriformospora indica (Sebacinales, Basidiomycota) and provide a global characterization of fungal transcriptional responses...
ORGANISM(S): Piriformospora indica 
2011-09-30 | E-GEOD-31266 | biostudies-arrayexpress
TranscriptomicsPiriformospora indica on Arabidopsis and barley root material
Broad-host root endophytes establish long-term interactions with a large variety of plants, thereby playing a significant role in natural and managed ecosystems and in evolution of land plants. To exploit plants as living substrates and to establish a compatible interaction with morphologically and ...
ORGANISM(S): Piriformospora indica 
2013-07-22 | E-GEOD-47775 | biostudies-arrayexpress
TranscriptomicsGene expression changes in Sebacina vermifera- Arabidopsis thaliana mycorrhizal roots compared to Sebacina vermifera free-living mycelium
Illumina HiSeq technology was used to generate mRNA profiles from Sebacina vermifera mycorrhizal roots compared to free-living mycelium . Mycorrhizal roots were harvested after 3, 7 and 14 days, pooled and used for RNA extraction. Reads of 2X100bp were generated and aligned to Sebacina vermifera (h...
ORGANISM(S): Serendipita vermifera 
2015-02-06 | E-GEOD-63923 | biostudies-arrayexpress
ProteomicsHost-adapted enzymatic deconstruction of acetylated xylan enables mutualistic colonization of monocot roots
Intracellular accommodation of beneficial fungi requires host cell wall remodeling that avoids excessive immune activation. The root endophyte Serendipita indica, a generalist mutualist capable of colonizing both monocot and dicot plants, employs a monocot-specific enzymatic module to deconstruct ac...
ORGANISM(S): Serendipita indica DSM 11827 
2026-04-20 | PXD075759 | Pride
Symbiosis Host immune modulation Hemicellulose remodeling Plant-microbe interactions Acetyl-xylan esterase Carbohydrate-active enzymes (cazymes) 
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