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TranscriptomicsSeminoma and embryonal carcinoma footprints identified by analysis of integrated genome-wide epigenetic and expression profiles of germ cell cancer cell lines (gene expression data).
Background: Germ Cell Cancers (GCC), originating from Primordial Germ Cells /gonocytes, are the most common cancer in young men, subdivided in seminoma (SE) and non-seminoma (NS, stem cell component: embryonal carcinoma (EC)). Somatic mutations are rarely found in GCC. It has been proposed that disr...
ORGANISM(S): Homo sapiens 
2014-06-01 | E-GEOD-56381 | biostudies-arrayexpress
GenomicsSeminoma and embryonal carcinoma footprints identified by analysis of integrated genome-wide epigenetic and expression profiles of germ cell cancer cell lines (ChIP-seq data).
Background: Germ Cell Cancers (GCC), originating from Primordial Germ Cells /gonocytes, are the most common cancer in young men, subdivided in seminoma (SE) and non-seminoma (NS, stem cell component: embryonal carcinoma (EC)). Somatic mutations are rarely found in GCC. It has been proposed that disr...
ORGANISM(S): Homo sapiens 
2014-06-01 | E-GEOD-56450 | biostudies-arrayexpress
TranscriptomicsGenome wide DNA methylation profiles provide clues to the origin and pathogenesis of germ cell tumors
Germ cell tumors (GCT) originate from germ cells at different developmental stages (GCT type I – V) They are thought to inherit their methylation profile from (early embryonic) germ cells which undergo a characteristic epigenetic “reset” during maturation. This study aims to provide insight into the...
ORGANISM(S): Homo sapiens 
2015-02-26 | E-GEOD-58538 | biostudies-arrayexpress
TranscriptomicsSeminoma and embryonal carcinoma footprints identified by analysis of integrated genome-wide epigenetic and expression profiles of germ cell cancer cell lines (methylation data).
Background: Germ Cell Cancers (GCC), originating from Primordial Germ Cells /gonocytes, are the most common cancer in young men, subdivided in seminoma (SE) and non-seminoma (NS, stem cell component: embryonal carcinoma (EC)). Somatic mutations are rarely found in GCC. It has been proposed that disr...
ORGANISM(S): Homo sapiens 
2014-06-01 | E-GEOD-56382 | biostudies-arrayexpress
TranscriptomicsA novel aCGH method for non-model organisms for assessing genomes and de-novo transcriptome sequencing reads (Danio rerio)
Genomes and transcriptomes of non-model organisms can be analyzed using next-generation sequencing technologies, but de-novo sequencing and annotating a full eukaryotic genome is still challenging. So, -omics experimentation with non-model organisms requires a suite of technologies to obtain reliabl...
ORGANISM(S): Danio rerio 
2014-05-19 | E-GEOD-52121 | biostudies-arrayexpress
TranscriptomicsHepatitis C virus functionally sequesters miR-122 [RNA-Seq]
Hepatitis C virus uniquely requires the liver specific microRNA-122 for replication, yet global effects on endogenous miRNA targets during infection are unexplored. Here, high-throughput sequencing and crosslinking immunoprecipitation (HITS-CLIP) experiments of human Argonaute (Ago) during HCV infec...
ORGANISM(S): Homo sapiens 
2015-01-06 | E-GEOD-64677 | biostudies-arrayexpress
UnknownWalking the talk for dementia: A unique immersive, embodied, and multi-experiential initiative.
Not available
S-EPMC10984440 | biostudies-literature
TranscriptomicsTranscription profiling of Saccharomyces cerevisiae reveals the regulation of reserve carbohydrate metabolism in S cerevisiae in response to nutrient availability
In Saccharomyces cerevisiae, glycogen and trehalose are important reserve carbohydrates that accumulate under nutrient limitation in batch cultures. An inherent draw-back of batch studies is that specific growth rate and substrate and product concentrations are variable over time and between culture...
ORGANISM(S): Saccharomyces cerevisiae 
2009-09-05 | E-GEOD-15465 | biostudies-arrayexpress
TranscriptomicsChromatin immunoprecipitation of centromeric proteins CenpA and CenpC from human cell lines containing a neocentromere in band 13q21
Chromatin Immunoprecipitation of Centromeric Proteins, CenpA or CenpC, from human cell lines containing a neocentromere in band 13q21
ORGANISM(S): Homo sapiens 
2006-11-06 | E-TABM-168 | biostudies-arrayexpress
ProteomicsPlasmodium falciparum schizont proteome
Proteome of the human malaria parasite Plasmodium falciparum at schizont life cycle stage during blood stage development
ORGANISM(S): Plasmodium falciparum Palo Alto/Uganda 
2018-02-13 | PXD008250 | Pride
Human malaria Schizont Plasmodium falciparum 
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