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TranscriptomicsIdentification of microRNA targets in tomato fruit development using high-throughput sequencing and degradome analysis
By using parallel analysis of RNA ends (PARE) for global identification of miRNA targets and comparing four different stages of tomato fruit development we identified a large number of target genes of miRNAs. PARE libraries were produced, one each, for tomato fruits at 5 days after pollination, matu...
ORGANISM(S): Solanum lycopersicum 
2013-04-05 | E-GEOD-42661 | biostudies-arrayexpress
TranscriptomicsComparison of tomato fruit gene expression data obtained by microarray analysis and by treatment of degradome sequencing data as an RNAseq experiment
This SuperSeries is composed of the SubSeries listed below. Refer to individual Series
ORGANISM(S): Solanum lycopersicum 
2013-04-05 | E-GEOD-42784 | biostudies-arrayexpress
TranscriptomicsGene expression in three stages of ripening tomato fruit
Gene expression in three stages of ripening tomato fruit (variety Ailsa Craig) was determined with the EUTOM3 Affymetrix array in order to compare with degradrome sequencing data from study GSE42661, treated as RNAseq. three replicates of each stage (MG, mature green; T, turning/breaker; RR, red rip...
ORGANISM(S): Solanum lycopersicum 
2013-04-05 | E-GEOD-42783 | biostudies-arrayexpress
MetabolomicsMetabolomics of Solanum lycopersicum infected by Phytophthora infestans leads to Late blight detection and reveals metabolic differences in infection times
Tomato crops suffer attacks of various pathogens that cause large production losses. Late blight caused by Phytophthora infestans is a devastating disease in tomatoes because of its difficultly to control. Here, we applied metabolomics based on liquid chromatography–mass spectrometry (LC-MS) and met...
2019-01-24 | MTBLS618 | MetaboLights
UnknownRe-evaluation of transcription factor function in tomato fruit development and ripening with CRISPR/Cas9-mutagenesis.
Not available
S-EPMC6368595 | biostudies-literature
UnknownA comprehensive model of tomato fruit ripening regulation by the transcription factors NOR-like1, NAC-NOR, and MADS-RIN.
Not available
S-EPMC12305540 | biostudies-literature
UnknownIdentification of Loci Affecting Accumulation of Secondary Metabolites in Tomato Fruit of a Solanum lycopersicum × Solanum chmielewskii Introgression Line Population.
Not available
S-EPMC5040107 | biostudies-literature
UnknownExploration of a Resequenced Tomato Core Collection for Phenotypic and Genotypic Variation in Plant Growth and Fruit Quality Traits.
Not available
S-EPMC7692805 | biostudies-literature
UnknownIdentification, cloning and characterization of the tomato TCP transcription factor family.
Not available
S-EPMC4070083 | biostudies-literature
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