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TranscriptomicsComparison of tomato fruit gene expression data obtained by microarray analysis and by treatment of degradome sequencing data as an RNAseq experiment
This SuperSeries is composed of the SubSeries listed below. Refer to individual Series
ORGANISM(S): Solanum lycopersicum 
2013-04-05 | E-GEOD-42784 | biostudies-arrayexpress
TranscriptomicsGene expression in three stages of ripening tomato fruit
Gene expression in three stages of ripening tomato fruit (variety Ailsa Craig) was determined with the EUTOM3 Affymetrix array in order to compare with degradrome sequencing data from study GSE42661, treated as RNAseq. three replicates of each stage (MG, mature green; T, turning/breaker; RR, red rip...
ORGANISM(S): Solanum lycopersicum 
2013-04-05 | E-GEOD-42783 | biostudies-arrayexpress
TranscriptomicsIdentification of microRNA targets in tomato fruit development using high-throughput sequencing and degradome analysis
By using parallel analysis of RNA ends (PARE) for global identification of miRNA targets and comparing four different stages of tomato fruit development we identified a large number of target genes of miRNAs. PARE libraries were produced, one each, for tomato fruits at 5 days after pollination, matu...
ORGANISM(S): Solanum lycopersicum 
2013-04-05 | E-GEOD-42661 | biostudies-arrayexpress
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