de Ru Arnoud A - OmicsDI

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Transcriptomics (3)
Unknown (1)
Proteomics (1)
Metabolomics (1)

Organisms

Mus musculus (3)

Repository

biostudies-arrayexpress (3)
MassIVE (1)
MetaboLights (1)

Technology Type

Mass spectrometry (1)

Instrument Platform

Orbitrap Fusion Lumos (1)
Flow injection analysis MS - negative (1)

Publication Date

2015 (3)
2020 (1)
2024 (1)

CHEBI ID

CHEBI:74309; HMDB0062518; HMDB62518 (1)
CHEBI:133815; HMDB0030856; HMDB0040140; HMDB30856; HMDB40140 (1)
CHEBI:63334; HMDB0015414; HMDB15414 (1)
CHEBI:89499; HMDB0002522; HMDB0002586; HMDB0002642; HMDB02522; HMDB02586; HMDB02642 (1)
CHEBI:239286; HMDB0015200; HMDB15200 (1)
CHEBI:85165; HMDB0062591; HMDB62591 (1)
CHEBI:85166; HMDB0013043; HMDB0013045; HMDB0013653; HMDB0062663; HMDB13043; HMDB13044; HMDB13045; HMDB13653; HMDB62663 (1)
CHEBI:775715; HMDB0015648; HMDB15648 (1)
CHEBI:63818; HMDB0062325; HMDB62325 (1)
CHEBI:71169; HMDB0000912; HMDB00912 (1)
CHEBI:84634; HMDB0005066; HMDB05066 (1)
CHEBI:48983; HMDB0032717; HMDB0033437; HMDB32717; HMDB33437 (1)
CHEBI:479320; HMDB0013308; HMDB0062338; HMDB13308; HMDB62338 (1)
CHEBI:479286; HMDB0013631; HMDB13631 (1)
CHEBI:51164; HMDB0014727; HMDB14727 (1)
CHEBI:50091; HMDB0004645; HMDB04645 (1)
CHEBI:70811; HMDB0013240; HMDB13240 (1)
CHEBI:132607; HMDB0030555; HMDB0094679; HMDB30555; HMDB94679 (1)
CHEBI:58592; HMDB0034765; HMDB0034768; HMDB0038636; HMDB0062575; HMDB34765; HMDB34768; HMDB38636; HMDB62575 (1)
CHEBI:110179; CHEBI:132606; HMDB0030767; HMDB0037774; HMDB0037775; HMDB0094645; HMDB30767; HMDB37774; HMDB37775; HMDB94645 (1)
CHEBI:61313; HMDB0005943; HMDB0040180; HMDB05943; HMDB40180 (1)
CHEBI:385866; HMDB0000706; HMDB0011167; HMDB0028760; HMDB0028991; HMDB00706; HMDB06113; HMDB11167; HMDB28760; HMDB28991 (1)
CHEBI:74303; HMDB0013238; HMDB13238 (1)
CHEBI:417823; HMDB0030965; HMDB0037517; HMDB30965; HMDB37517 (1)
CHEBI:82944; HMDB0062550; HMDB62550 (1)
CHEBI:68433; CHEBI:68434; CHEBI:73506; HMDB0011170; HMDB0011171; HMDB0028822; HMDB0028823; HMDB0029152; HMDB0029153; HMDB11170; HMDB11171; HMDB28822; HMDB28823; HMDB29152; HMDB29153 (1)
CHEBI:70749; CHEBI:84834; HMDB0000705; HMDB0000756; HMDB00705; HMDB00756 (1)
CHEBI:87428; HMDB0031061; HMDB0059866; HMDB0061657; HMDB31061; HMDB59866; HMDB61657 (1)
CHEBI:20607; HMDB0000982; HMDB0039229; HMDB00982; HMDB39229 (1)
CHEBI:17976; HMDB0033197; HMDB0036047; HMDB0059661; HMDB33197; HMDB36047; HMDB59661 (1)

Metabolite Name

CDP-DG(18:2(9Z,11Z)/a-17:0) (1)
Pentadecanoyl-CoA (1)
PS(DiMe(11,3)/MonoMe(11,5)) (1)
PS(14:0/22:6(4Z,7Z,10Z,13Z,16Z,19Z)) (1)
Ophiopogonin C'' (1)
DSLET (1)
6''''-Malonylapiin (1)
(5-{4-[2-(3,4-dihydroxyphenyl)-3,5,7-trihydroxy-3,4-dihydro-2H-1-benzopyran... (1)
Myricetin 7-(6''''-galloylglucoside) (1)
(R)-6''-O-(4-Geranyloxy-2-hydroxycinnamoyl)-marmin (1)
Sultamicillin tosilate (1)
6-{3-[6-(3,4-dihydroxy-6-methyl-5-oxooxan-2-yl)-5,7-dihydroxy-4-oxo-4H-chro... (1)
[(6-{[5,7-dihydroxy-2-(4-oxocyclohexa-2,5-dien-1-ylidene)-2H-chromen-3-yl]o... (1)
3,3''-Bis(4''''-hydroxyanigorufone) (1)
Isorhamnetin 3-(6''''-malonylglucoside) (1)
({3,4,5-trihydroxy-6-[3,5,7-trihydroxy-2-(2,4,5-trihydroxyphenyl)-3,4-dihyd... (1)
4-{[4-(Diethylamino)phenyl](2,4-disulfophenyl)methylene}-N,N-diethyl-2,5-cy... (1)
1-Phosphatidyl-1D-myo-inositol 3,4-bisphosphate (1)
6-(2-{8,8-dimethyl-2-oxo-2H,8H-pyrano[2,3-f]chromen-3-yl}-5-methoxyphenoxy)... (1)
6-(2,4-dihydroxyphenyl)-2-{3-[3-(2,4-dihydroxyphenyl)propanoyl]-2,6-dihydro... (1)
Provincialin; NPC (1)
3,4,5-trihydroxy-6-{4-[1-hydroxy-3-(5-methoxy-2,2-dimethyl-2H-chromen-6-yl)... (1)
3,4,5-trihydroxy-6-({15-hydroxy-11-methoxy-13-oxo-6,8,20-trioxapentacyclo[1... (1)
(7''R,8''R)-4,7''-Epoxy-3''-methoxy-4'',5,9,9''-lignanetetrol 9''-glucoside (1)
(4-{3-[2,4-dihydroxy-5-(3-methylbut-2-en-1-yl)phenyl]-2-hydroxy-3-oxopropyl... (1)
8-(2-{[(2E)-3-(3,4-dihydroxyphenyl)prop-2-enoyl]oxy}propan-2-yl)-2-oxo-2H,8... (1)
GW 1929 (1)
2-(2,4-dihydroxyphenyl)-3-(3,7-dimethylocta-2,6-dien-1-yl)-5,7-dihydroxy-6-... (1)
13-Hydroxy-5''-O-methylmelledonal (1)
Vindoline; 1-Lyso-2-arachidonoyl-phosphatidate (1)

Study type

MicroRNA profiling by array (2)
Transcription profiling by array (1)

Release Date

2015 (3)
2026 (1)

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AMPK activation induces RALDH+ tolerogenic dendritic cells by rewiring glucose and lipid metabolism.

Dendritic cell (DC) activation and function are underpinned by profound changes in cellular metabolism. Several studies indicate that the ability of DCs to promote tolerance is dependent on catabolic metabolism. Yet the contribution of AMP-activated kinase (AMPK), a central energy sensor promoting c...

2024-08-16 | MTBLS10647 | MetaboLights

Site-specific glycosylation mapping of Fc gamma receptor IIIb from neutrophils of individual healthy donors

The uploaded dateset corresponds to MS1 and MS2 spectra obtained for Fc gamma receptor IIIb isolated from neutrophils of individual healthy donors. They represent NA1/NA2, NA2/NA2, NA2/NA2 allotype respectively. Based on the data, the targeted analysis of the N-glycosylation has been performed for t...

ORGANISM(S): Homo Sapiens (ncbitaxon:9606)

2020-08-05 | MSV000085913 | MassIVE

MiRNA expression profiling or ERCC1 deficient and control mouse lineage negative, ScaI positive, Kit positive (LSK) bone marrow cells

MiRNA expression differences induced by ERCC1 deficiency.

ORGANISM(S): Mus musculus

2015-04-09 | E-MTAB-3310 | biostudies-arrayexpress

MiRNA expression profiling or ERCC1 deficient and control mouse lineage negative bone marrow cells

MiRNA expression differences induced by ERCC1 deficiency.

ORGANISM(S): Mus musculus

2015-04-09 | E-MTAB-3298 | biostudies-arrayexpress

Gene expression profiling or ERCC1 deficient and control mouse lineage negative bone marrow cells

Transcriptome differences induced by ERCC1 deficiency.