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MetabolomicsGNPS - OSU - STAK - Human Fecal Samples - Ketone Supplementation
Human fecal samples from two timepoints (baseline and post) during a ketone supplementation into a ketogenic diet. Qiita ID 13473. Data was acquired using a Bruker Maxis Impact and C18 RP-UHPLC. Positive polarity acquisition of LC-MS/MS.
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2020-11-18 | MSV000086482 | GNPS
MetabolomicsGNPS human saliva derived in vitro biofilms
Oral in vitro biofilms were established from human saliva and grown as described in Edlund et al. 2013 (Microbiome, doi:10.1186/2049-2618-1-25). Replicate samples were collected for small molecule- and metatranscriptome analyses at pH 7 (prior to glucose amendment), pH 4.2 (6 hrs after glucose amend...
ORGANISM(S): Oral Bacterial Flora 
2014-04-10 | MSV000078583 | GNPS
MetabolomicsGNPS Endophytic Fungus Pure Culture (Costa Rica) microbeMASST contribution
extract of pure culture broth, first collection (PI: Giselle Tamayo-Castillo, Priscila Chaverri, Ph.D. candidate Efrain Escudero)
ORGANISM(S): Rubiaceae Endophytic Fungus Trichoderma (ncbitaxon:5543) 
2022-07-03 | MSV000089799 | GNPS
MetabolomicsGNPS - GFOP - Food - Plate3_fermentedLQ
Metabolic analysis of fermented liquids, standard ethanol extraction. Data was acquired using a Bruker Daltonics maXis Impact and C18 RP-UHPLC. Positive polarity acquisition of LC-MS/MS.
ORGANISM(S): Food Fermentation Metagenome (ncbitaxon:1154581) 
2017-11-02 | MSV000081666 | GNPS
MetabolomicsGNPS Endophytic Fungus Pure Culture (Costa Rica) microbeMASST contribution
extract of pure culture broth, first collection (PI: Giselle Tamayo-Castillo, Priscila Chaverri, Ph.D. candidate Efrain Escudero)
ORGANISM(S): Rubiaceae Endophytic Fungus Trichoderma (ncbitaxon:5543) 
2022-07-03 | MSV000089798 | GNPS
MetabolomicsGNPS Streptococcus mutans biofilm
Streptococcus mutans were grown in rich SHI-medium as biofilms anaerobically. Biofilms were starved in minimal medium followed by glucose amendment (at pH 7). Replicate samples for MS/MS-small molecule and transcription analyses were collected at pH 7 and at pH 3.5 (20 hrs after glucose spiking). O...
ORGANISM(S): Streptococcus Mutans Ua159 
2014-04-10 | MSV000078581 | GNPS
MetabolomicsGNPS - GFOP - Food - Plate4_fermented
Metabolic analysis of fermented food samples, standard ethanol extraction. Data was acquired using a Bruker Daltonics maXis Impact and C18 RP-UHPLC. Positive polarity acquisition of LC-MS/MS.
ORGANISM(S): Food Fermentation Metagenome (ncbitaxon:1154581) 
2017-11-02 | MSV000081665 | GNPS
MetabolomicsGNPS Endophytic Fungus Pure Culture (Costa Rica) microbeMASST contribution
extract of pure culture broth, first collection (PI: Giselle Tamayo-Castillo, Priscila Chaverri, Ph.D. candidate Efrain Escudero)
ORGANISM(S): Sarocladium Kiliense (ncbitaxon:45277) Rubiaceae Endophytic Fungus 
2022-07-03 | MSV000089797 | GNPS
MetabolomicsGNPS - Paenibacillus and Pseudomonas | coffee culture | MS NEG
Cultures of Paenibacillus peoriae DSM 8320 NCBI:txid1087481 | Pseudomonas fluorescens DSM 106121 NCBI:txid294 and unknown Paenibacillus strain on ground coffee. Extracts of 50% MeOH:water analyzed by LC-MS/MS performed in an UltiMate 3000 UPLC system (Thermo Scientific) using a Kinetex 1.7 um C18 re...
ORGANISM(S): Paenibacillus Peoriae Kctc 3763 (ncbitaxon:1087481) Pseudomonas Fluorescens (ncbitaxon:294) 
2020-11-18 | MSV000086478 | GNPS
MetabolomicsGNPS oral in vitro biofilms
These biofilms were established from saliva samples as described in Edlund et al. 2013 (Microbiome, doi:10.1186/2049-2618-1-25). After starving the biofilms in minimal medium anaerobiaclly glucose was added to the cultures. Samples for metatranscriptomics and metabolomics were collected in parallel ...
ORGANISM(S): Human Oral Microbial Flora 
2014-04-10 | MSV000078579 | GNPS
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