Browse
Submit Data
Databases
API
Help

Dataset Information

8 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

E-MEXP-2240

ABSTRACT: Transcription profiling by array of leaves from BASS knock-out Arabidopsis plants

PROVIDER: E-MEXP-2240 | ExpressionAtlas | 2014-07-03

REPOSITORIES: ExpressionAtlas

ACCESS DATA

Json Xml

Similar Datasets

Comparative proteomics revealed the role of Jasmonate ZIM Domain 7 (JAZ7) in plant drought tolerance

Project description:we focused on characterizing proteomicchanges involving JAZ7 when Arabidopsis thaliana plants were withhold water. To understand the phenotypes and elucidate the regulatory function of JAZ7, leaves from wild type(WT), jaz7 knock out(KO), jaz7 overexpression(OE)were harvested for proteomics analysis after drought treatment for 18days. Using TMT-based isobaric labeling quantitative proteomics approach,

2022-03-01 | PXD009002 | Pride

Untargeted primary metabolite profiling in Arabidopsis thaliana

Project description:The goal of this project is to compare the primary metabolite profile in different tissue types of the model plant Arabidopsis thaliana. Specifically, plants were grown hydroponically under the long-day (16hr light/day) condition at 21C. Tissue samples, including leaves, inflorescences, and roots were harvest 4 1/2 weeks post sowing. Untargeted primary metabolites profiling was carried out using GCTOF.

2021-12-09 | ST002012 | MetabolomicsWorkbench

Mature Arabidopsis leaves: RAP2.6L overexpressing vs wild-type (Ws)

Project description:Transcriptional profiling of Arabidopsis thaliana, comparing control wild-type (ecotype Wassilewskija, Ws) leaves with leaves from transgenic plants overexpressing the transcription factor RAP2.6L under control of the cauliflower mosaic virus 35S promoter (RAP2.6L-OX; this line was originally described in Krishnaswamy et al (2010)).

2017-06-30 | GSE90601 | GEO

Transcriptome profiling of knock mutant and RNAi lines for small GTPase, nucleolar GTP-binding protein 1 (NOG1) in Arabidopsis

Project description:Gene expression profiling of knock out mutant NOG1-1 and RNAi line NOG1-2 was studied in comparison to wild type in leaves of seven days old plants.

2017-07-19 | E-MTAB-5946 | biostudies-arrayexpress

sqe1-Functional analysis and biotechnological application of genes involved in drought and salt stress tolerance

Project description:au07-13_sqe1 - sqe1 - Arabidopsis transcriptome microarray from wild type and mutant plants. - Arabidopsis microarray from Ler ecotype and the sqe-1 mutant. Keywords: gene knock out

2009-01-24 | GSE10349 | GEO

Study of the function of AtOXR2 in stress response by transcriptional profiling of Arabidopsis thaliana with incresed expression of AtOXR2 (oeOXR2 plants)

Project description:Analysis of transcriptional profiling of Arabidopsis Col-0 leaves from wild-type and plants with incresed levels of AtOXR2 (oeOXR2 plants)

2018-05-22 | GSE114689 | GEO

The Arabidopsis transcription factor TCP5 during petal and inflorescence development

Project description:RNA-sequencing performed on petals and inflorescence of Arabidopsis plants. The study provides insight into the role of the TCP5 transcription factor and its molecular mechanism underlying petal growth, using knock-out, overexpression and induction lines on which RNA-sequencing was performed.

2018-03-14 | GSE103762 | GEO

Differential expression profiling of Arabidopsis ABHD11 knock-out mutant

Project description:ABHD11 has a acylhydrolase activity. Knock-out of abhd11 increases phospholipids in plant leaves. Wholegenome array was done to check the differential expressed genes in lipid metabolic pathway

2015-10-01 | GSE70672 | GEO

E-MEXP-1783

Project description:Transcription profiling by array of Arabidopsis TROL knock-out plants

2014-07-03 | E-MEXP-1783 | ExpressionAtlas

Root and shoot Jamonic Acid induction in Brassica oleraceae

Project description:Brassica oleraceae plants were treated with jasmonic acid either at the roots or two leaves. An acidic (HCl) water sollution with the same pH as the jasmonic acid sollution was also applied to two leaves of the root jasmonic acid treated plants, and to the roots of leaf jasmonic acid treated plants. Control plants received a mock treatment on roots and leaves with acidic water of the same pH as the jasmonic acid sollution. The whole root system and two systemic leaves were harvested separately at 6, 18 and 30 h after treatment. For each time point, tissue and treatment, three biological replicates (except two replicates for 'Root-Cont-18h' sample) were made consisting of pooled tissue samples from 10 plants. Gene expression was analyzed in both tissues using the 29,000 element Arabidopsis Oligonucleotide Microarrays (Qiagen-Operon Arabidopsis Genome Array Ready Oligo Set version 3.0).

2012-12-18 | GSE38784 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data