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Yamada2003_JAK_STAT_SOCS1_knockout


ABSTRACT: NCBS Curation Comments: This model shows the control mechanism of Jak-Stat pathway, here SOCS1 (Suppressor of cytokine signaling-I) was identified as the negative regulator of Jak and STAT signal transduction pathway. This is the knockout version of Jak-Stat pathway in this model the SOCS1 has been knocked out i.e it formation is not shown. The graphs are almost similar to the graphs as shown in the paper but STAT1n graph has some ambiguities. Thanks to Dr Satoshi Yamada for clarifying some of those ambiguities and providing the values used in simulations. Biomodels Curation Comments: The model reproduces the figures 2 (B,D,F,H,J,L,N) corresponding to JAK/STAT activation in SOCS1 knock out cells. The model was successfully tested on MathSBML This model originates from BioModels Database: A Database of Annotated Published Models. It is copyright (c) 2005-2006 The BioModels Team. For more information see the terms of use .

OTHER RELATED OMICS DATASETS IN: BIOMD0000000093

SUBMITTER: Sharat Vayttaden  

PROVIDER: BIOMD0000000094 | BioModels | 2007-01-26

REPOSITORIES: BioModels

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Publications

Control mechanism of JAK/STAT signal transduction pathway.

Yamada Satoshi S   Shiono Satoru S   Joo Akiko A   Yoshimura Akihiko A  

FEBS letters 20030101 1-3


Suppressor of cytokine signaling-1 (SOCS1) was identified as the negative regulator of Janus kinase (JAK) and signal transducer and activator of transcription (STAT) signal transduction pathway. However, the kinetics and control mechanism of the pathway have not yet been fully understood. We have developed the computer simulation of the JAK/STAT pathway. Without nuclear phosphatase, SOCS1's binding to JAK did not cause the decrease in nuclear phosphorylated STAT1. However, without SH2 domain-con  ...[more]

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