Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

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MelR experiment 1


ABSTRACT: Three independent repeats of the same experiment, comparing gene expression in E. coli cultures expressing either no MelR, or a constitutively active MelR* protein.

ORGANISM(S): Escherichia coli

SUBMITTER: Jon Hobman 

PROVIDER: E-GEOD-1421 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Publications

Genomic studies with Escherichia coli MelR protein: applications of chromatin immunoprecipitation and microarrays.

Grainger David C DC   Overton Timothy W TW   Reppas Nikos N   Wade Joseph T JT   Tamai Eiji E   Hobman Jon L JL   Constantinidou Chrystala C   Struhl Kevin K   Church George G   Busby Stephen J W SJ  

Journal of bacteriology 20041001 20


Escherichia coli MelR protein is a transcription activator that is essential for melibiose-dependent expression of the melAB genes. We have used chromatin immunoprecipitation to study the binding of MelR and RNA polymerase to the melAB promoter in vivo. Our results show that MelR is associated with promoter DNA, both in the absence and presence of the inducer melibiose. In contrast, RNA polymerase is recruited to the melAB promoter only in the presence of inducer. The MelR DK261 positive control  ...[more]

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