Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

0

Transcriptome analysis reveals a major impact of Tyk2 on the expression of interferon responsive and metabolic genes


ABSTRACT: Peritoneal macrophages of Tyk2-/- and wildtype (wt) mice were compared before and after six hours of LPS treatment. Interferon responsive genes are lower expressed in Tyk2-/- macrophages at the basal level, metabolic genes higher before, but even more after LPS treatment. cDNA from macrophages from three replicates of three Tyk2-/- and three wt mice before and after six hours of LPS treatment, respectively, was hybridized to a microarray and analyzed.

ORGANISM(S): Mus musculus

SUBMITTER: Claus Vogl 

PROVIDER: E-GEOD-19733 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

altmetric image

Publications

Transcriptome analysis reveals a major impact of JAK protein tyrosine kinase 2 (Tyk2) on the expression of interferon-responsive and metabolic genes.

Vogl Claus C   Flatt Thomas T   Fuhrmann Bernd B   Hofmann Elisabeth E   Wallner Barbara B   Stiefvater Rita R   Kovarik Pavel P   Strobl Birgit B   Müller Mathias M  

BMC genomics 20100325


<h4>Background</h4>Tyrosine kinase 2 (Tyk2), a central component of Janus kinase/signal transducer and activator of transcription (JAK/STAT) signaling, has major effects on innate immunity and inflammation. Mice lacking Tyk2 are resistant to endotoxin shock induced by lipopolysaccharide (LPS), and Tyk2 deficient macrophages fail to efficiently induce interferon alpha/beta after LPS treatment. However, how Tyk2 globally regulates transcription of downstream target genes remains unknown. Here we e  ...[more]

Similar Datasets

2010-04-01 | GSE19733 | GEO
2010-12-22 | E-GEOD-19627 | biostudies-arrayexpress
2016-06-13 | PXD002890 | Pride
2010-12-22 | E-GEOD-19625 | biostudies-arrayexpress
2015-12-07 | E-GEOD-68968 | biostudies-arrayexpress
2012-03-07 | E-GEOD-32141 | biostudies-arrayexpress
| PRJNA152753 | ENA
2012-03-07 | E-GEOD-32324 | biostudies-arrayexpress
2012-03-23 | E-GEOD-32359 | biostudies-arrayexpress
2014-03-24 | GSE44292 | GEO