Browse
Submit Data
Databases
API
Help

Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

17 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Candida Iron deprived Cells: Control vs. BPS treated

ABSTRACT: Transcriptional profiling of iron deprived Candida cells comparing the WT vs BPS (Iron deprived) cells One-condition experiment, WT vs. BPS treated cells. Biological replicates: 3 control, 3 treated, independently grown and harvested.

ORGANISM(S): Candida albicans

SUBMITTER: Rajendra Prasad

PROVIDER: E-GEOD-25394 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

ACCESS DATA

Json Xml

Similar Datasets

Candida Iron deprived Cells: Control vs. BPS treated

Project description:Transcriptional profiling of iron deprived Candida cells comparing the WT vs BPS (Iron deprived) cells

2010-11-17 | GSE25394 | GEO

Candida albicans

Project description:Candida Iron deprived Cells: Control vs. BPS treated

| PRJNA134125 | ENA

Hsf1 Chip on chip on wildtype(WT) and iron deprived (BPS) cells of Candida albicans using polyclonal antibody

Project description:Comparative analysis of genome wide binding sites of Hsf1 in normal and iron-deprived conditions

2019-02-01 | GSE110889 | GEO

Hsf1 Chip on chip on wildtype(WT) and iron deprived (BPS) cells of Candida albicans using polyclonal antibody

Project description:Hsf1 Chip on chip on wildtype(WT) and iron deprived (BPS) cells of Candida albicans using polyclonal antibody

| PRJNA434741 | ENA

Effect of Pseudomonas fluorescens pyoverdine on A. thaliana defence responses and iron homeostasis [INRA13-03_PYO]

Project description:ra13-03_pyo - effect of pseudomonas fluorescens pyoverdine on a.thaliana defence responses and iron homeostasis - Analyse de l’effet d’un traitement par la pyoverdine sur les gènes liés à l’homéostasie du fer et à l’induction des réactions de défense. - Arabidopsis thaliana plants cultivated in hydroponic conditions were treated for 3 days by pyoverdin, a bacteriosiderophore from Pseudomonas fluorescens C7R12 in a medium supplemented or deprived of iron. 12 dye-swap - organ comparison,treated vs untreated comparison

2015-09-01 | E-GEOD-71163 | biostudies-arrayexpress

P104 mouse non-deprived vs. deprived visual cortex

Project description:Wild-type (C57Bl6) mice underwent monocular enucleation at P100 and were sacrificed 4 days later at P104. Bilateral (non-deprived and deprived) visual cortex was dissected from 1-mm thick coronal sections, and total RNA was extracted from the tissue lysate using Trizol (Gibco-BRL). Keywords: repeat

2006-02-24 | GSE4266 | GEO

P46 mouse non-deprived vs. deprived visual cortex

Project description:Wild-type (C57Bl6) mice underwent monocular enucleation at P42 and were sacrificed 4 days later at P46. Bilateral (non-deprived and deprived) visual cortex was dissected from 1-mm thick coronal sections, and total RNA was extracted from the tissue lysate using Trizol (Gibco-BRL). Keywords: repeat

2006-02-24 | GSE4265 | GEO

P24 mouse non-deprived vs. deprived visual cortex

Project description:Wild-type (C57Bl6) mice underwent monocular enucleation at P20 and were sacrificed 4 days later at P24. Bilateral (non-deprived and deprived) visual cortex was dissected from 1-mm thick coronal sections, and total RNA was extracted from the tissue lysate using Trizol (Gibco-BRL). Keywords: repeat

2006-02-24 | GSE4264 | GEO

P18 mouse non-deprived vs. deprived visual cortex

Project description:Wild-type (C57Bl6) mice underwent monocular enucleation at P14 and were sacrificed 4 days later at P18. Bilateral (non-deprived and deprived) visual cortex was dissected from 1-mm thick coronal sections, and total RNA was extracted from the tissue lysate using Trizol (Gibco-BRL). Keywords: repeat

2006-02-24 | GSE4263 | GEO

Saccharomyces cerevisiae: DSB mapping by Break-chip in a two-color experiment (G1 control vs. S phase samples)

Project description:Break-chip (microarray-based double strand break mapping) analysis of mec1 cells recovering from 200 mM hydroxyurea in the presence or absence of 0.8 micromolar bathophenanthroline sulfonate (BPS). We asked if the presence of an iron chelator, BPS, during cell recovery from transient exposure to 200 mM hydroxyurea changes the global patterns of DNA double strand breaks (DSBs). We used a yeast checkpoint mutant, mec1, which has been shown to produce DSBs at replication forks after hydroxyurea was removed from the cell culture. We synchronously released cells from the G1/S transition into S phase in the presence of 200 mM hydroxyurea. After 1h treatment, the drug was removed and cells were allowed to recover in fresh medium for 1h in the presence or absence of 0.8 micromolar BPS. Recover (R) samples, R-1h-BPS and R-1h+BPS, as well as the G1 control samples were collected. Break-chip analysis was performed as previously described (Feng et al., G3(Bethesda) 2011 Oct;1(5):327-35. doi: 10.1534/g3.111.000554).

2015-01-12 | E-GEOD-64446 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data