Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

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Transcriptional responses of the two-spotted spider mite (Tetranychus urticae) after transfer to different plant hosts


ABSTRACT: We generated 38-bp Illumina reads from messenger RNA libraries from mites transferred from their preferred laboratory host, bean (Phaseolus vulgaris cv. California Red Kidney), to one of three hosts: bean, Arabidopsis thaliana (Bla-2 accession) and the tomato (Solanum lycopersicum; genotype Heinz 1706). Larvae were carefully collected from bean plants and transferred to the treatment plant. Mites were reared on these plants for ~24 hours, after which mites were collected for mRNA library preparation. Samples were a mix of males and females. The goal of the study was to identify genes that may underlie the ability of mites to be herbivores on different host plants. Mites were transferred from host bean plants to two non-preferred hosts (Arabidopsis thaliana and tomato). RNA was then collected, and RNA-seq was performed on the Illumina platform. For each of three host plants, three biological replicates were generated.

ORGANISM(S): Tetranychus urticae

SUBMITTER: Richard Clark 

PROVIDER: E-GEOD-32009 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Publications

The genome of Tetranychus urticae reveals herbivorous pest adaptations.

Grbić Miodrag M   Van Leeuwen Thomas T   Clark Richard M RM   Rombauts Stephane S   Rouzé Pierre P   Grbić Vojislava V   Osborne Edward J EJ   Dermauw Wannes W   Ngoc Phuong Cao Thi PC   Ortego Félix F   Hernández-Crespo Pedro P   Diaz Isabel I   Martinez Manuel M   Navajas Maria M   Sucena Élio É   Magalhães Sara S   Nagy Lisa L   Pace Ryan M RM   Djuranović Sergej S   Smagghe Guy G   Iga Masatoshi M   Christiaens Olivier O   Veenstra Jan A JA   Ewer John J   Villalobos Rodrigo Mancilla RM   Hutter Jeffrey L JL   Hudson Stephen D SD   Velez Marisela M   Yi Soojin V SV   Zeng Jia J   Pires-daSilva Andre A   Roch Fernando F   Cazaux Marc M   Navarro Marie M   Zhurov Vladimir V   Acevedo Gustavo G   Bjelica Anica A   Fawcett Jeffrey A JA   Bonnet Eric E   Martens Cindy C   Baele Guy G   Wissler Lothar L   Sanchez-Rodriguez Aminael A   Tirry Luc L   Blais Catherine C   Demeestere Kristof K   Henz Stefan R SR   Gregory T Ryan TR   Mathieu Johannes J   Verdon Lou L   Farinelli Laurent L   Schmutz Jeremy J   Lindquist Erika E   Feyereisen René R   Van de Peer Yves Y  

Nature 20111123 7374


The spider mite Tetranychus urticae is a cosmopolitan agricultural pest with an extensive host plant range and an extreme record of pesticide resistance. Here we present the completely sequenced and annotated spider mite genome, representing the first complete chelicerate genome. At 90 megabases T. urticae has the smallest sequenced arthropod genome. Compared with other arthropods, the spider mite genome shows unique changes in the hormonal environment and organization of the Hox complex, and al  ...[more]

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