Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

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Transcriptome response to embolism in stems of P. trichocarpa


ABSTRACT: Embolism and the refilling of xylem vessels are intrinsic to the ability of plants to handle the transport of water under tension. While the formation of an embolized vessel is an abiotic process, refilling against the pressure gradient requires biological activity to provide both the energy and the water needed to restore xylem transport capacity. We used microarrays to analyze the global transcriptome response of xylem parenchyma cells after embolism formation or infiltration of xylem tissue with sucrose solution. Plants subjected to artificial embolism treatment (ET), to sucrose infiltration treatment (ST), and controls (C) were selected for RNA extraction and hybridization on Affymetrix microarrays. Embolism was artificially induced through air-injection into the stems of the ET plants, while ST plants were exposed to osmotic stress by adding sucrose to the growing solution. Woody stems were respectively collected 90 minutes following the injection and after 90 minutes of exposure to sucrose.

ORGANISM(S): Populus trichocarpa

SUBMITTER: Francesca Secchi 

PROVIDER: E-GEOD-32322 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Publications

Transcriptome response to embolism formation in stems of Populus trichocarpa provides insight into signaling and the biology of refilling.

Secchi Francesca F   Gilbert Matthew E ME   Zwieniecki Maciej A MA  

Plant physiology 20110927 3


The mechanism of embolism repair in transpiring plants is still not understood, despite significant scientific effort. The refilling process is crucial to maintaining stem transport capacity and ensuring survival for plants experiencing dynamic changes in water stress. Refilling air-filled xylem vessels requires an energy and water source that can only be provided by adjacent living parenchyma cells. Here, we report an analysis of the transcriptome response of xylem parenchyma cells after emboli  ...[more]

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