Genome-wide TNFM-NM-1-induced p65 binding before and after telomerase inhibition in HeLa cells

ABSTRACT: Chromatin immunoprecipitation sequencing (ChIP-seq) was performed to analyze the effect of telomerase inhibition on TNFM-NM-1-induced genome-wide p65 binding in HeLa cells. By obtaining over 40 million uniquely mappable reads per sample from ChIP-seq, maps for TNFM-NM-1-induced p65 binding in absence and presence of an hTERT inhibitor, MST-312, were generated. As expected, TNFM-NM-1 treatment significantly increased genome-wide p65 occupancy. Interestingly, when cells were treated with MST-312 prior to TNFM-NM-1 stimulation, the number of p65 binding sites was reduced. In addition, some binding sites, including important p65 targets like IL6 and TNF, showed a reduced p65 occupancy with a minimum fold change of 1.5, after MST-312 exposure. Taken together, our ChIP-seq data indicate that tel

ORGANISM(S): Homo sapiens

SUBMITTER: Gaye Saginc 

PROVIDER: E-GEOD-41100 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress