Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

0

Rif1 Prevents Resection of DNA Breaks and Promotes Immunoglobulin Class Switching


ABSTRACT: DNA double-strand breaks (DSBs) represent a threat to the genome because they can lead to loss of genetic information and chromosome rearrangements. The DNA repair protein p53 binding protein 1 (53BP1) protects the genome by limiting nucleolytic processing of DSBs by a mechanism that requires its phosphorylation, but whether it does so directly is not known. Here we identify Rapl-interacting factor 1 (Rif1) as an Ataxia-Telangiectasia Mutated (ATM) phosphorylation-dependent interactor of 53BP1, and show that absence of Rif1 results in 5M-bM-^@M-^Y-3M-bM-^@M-^Y DNA end resection in mice. Consistent with enhanced DNA resection, Rif1 deficiency impairs DNA repair in the G1 and S phases of the cell cycle, interferes with class switch recombination (CSR) in B lymphocytes, and leads to accumulation of chromosome DSBs. Study of Rif1 DNA-end protection activity against resection via analysis of single-stranded DNA binding protein RPA and Rad51 accumulation at sites of AID-induced DNA damage by ChIP-seq. All samples shown in Fig. 4 are included (controls and test samples, 7 samples in total).

ORGANISM(S): Mus musculus

SUBMITTER: Thiago Oliveira 

PROVIDER: E-GEOD-42298 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

altmetric image

Publications


DNA double-strand breaks (DSBs) represent a threat to the genome because they can lead to the loss of genetic information and chromosome rearrangements. The DNA repair protein p53 binding protein 1 (53BP1) protects the genome by limiting nucleolytic processing of DSBs by a mechanism that requires its phosphorylation, but whether 53BP1 does so directly is not known. Here, we identify Rap1-interacting factor 1 (Rif1) as an ATM (ataxia-telangiectasia mutated) phosphorylation-dependent interactor of  ...[more]

Similar Datasets

2013-03-01 | GSE42298 | GEO
2022-04-14 | PXD031972 | Pride
2022-02-04 | PXD031311 | Pride
2021-09-10 | GSE181669 | GEO
2021-09-10 | GSE181668 | GEO
2021-09-10 | GSE181667 | GEO
2019-10-22 | GSE133806 | GEO
2019-10-22 | GSE133805 | GEO
2019-04-15 | PXD012137 | Pride
2012-09-30 | E-GEOD-35698 | biostudies-arrayexpress