Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

0

PRDM14 Ensures Naïve Pluripotency through Dual Regulation of Signaling and Epigenetic Pathways in Mouse Embryonic Stem Cells


ABSTRACT: Mouse embryonic stem cells (mESCs) fluctuate between a naïve inner cell mass (ICM)-like state and a primed epiblast-like state of pluripotency in serum, but are harnessed exclusively in a distinctive, naïve state of pluripotency that more faithfully captures the ICM state (the ground state) with inhibitors for mitogen-activated protein kinase (MAPK) and glycogen synthase kinase 3 pathways (2i). Understanding the mechanism ensuring the naïve states of pluripotency will be critical to realizing the full potential of ESCs. We show here that PRDM14, a PR domain-containing transcriptional regulator, ensures naïve pluripotency by a dual mechanism: Antagonizing fibroblast growth factor receptor (FGFR) signaling that is activated paradoxically by the core transcriptional circuitry for pluripotency and directs a primed state, and repressing de novo DNA methyltransferases that create a primed epiblast-like epigenome. PRDM14 exerts these functions by recruiting polycomb repressive complex 2 (PRC2) specifically to key targets and repressing their expression. ChIP-seq of PRDM14 and that of H3K27me3 and SUZ12 on Prdm14 wildtype and knockout ES cells

ORGANISM(S): Mus musculus

SUBMITTER: Yukihiro Yabuta 

PROVIDER: E-GEOD-42616 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

altmetric image

Publications

PRDM14 ensures naive pluripotency through dual regulation of signaling and epigenetic pathways in mouse embryonic stem cells.

Yamaji Masashi M   Ueda Jun J   Hayashi Katsuhiko K   Ohta Hiroshi H   Yabuta Yukihiro Y   Kurimoto Kazuki K   Nakato Ryuichiro R   Yamada Yasuhiro Y   Shirahige Katsuhiko K   Saitou Mitinori M  

Cell stem cell 20130117 3


In serum, mouse embryonic stem cells (mESCs) fluctuate between a naive inner cell mass (ICM)-like state and a primed epiblast-like state, but when cultured with inhibitors of the mitogen-activated protein kinase (MAPK) and glycogen synthase kinase 3 pathways (2i), they are harnessed exclusively in a distinct naive pluropotent state, the ground state, that more faithfully recapitulates the ICM. Understanding the mechanism underlying this naive pluripotent state will be critical for realizing the  ...[more]

Similar Datasets

2013-01-18 | E-GEOD-42580 | biostudies-arrayexpress
2013-01-18 | GSE42580 | GEO
2013-01-18 | GSE42616 | GEO
2020-07-15 | GSE134666 | GEO
2010-10-20 | E-GEOD-22767 | biostudies-arrayexpress
2020-05-08 | ST001377 | MetabolomicsWorkbench
2016-07-03 | E-GEOD-74547 | biostudies-arrayexpress
2015-09-14 | E-GEOD-70545 | biostudies-arrayexpress
2016-01-11 | E-GEOD-71932 | biostudies-arrayexpress
2022-04-06 | PXD023547 | Pride