Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

0

H3K4me3 Interactions with TAF3 Regulate Preinitiation Complex Assembly and Selective Gene Activation [ChIP-Seq]


ABSTRACT: Histone modifications regulate chromatin-dependent processes, yet the mechanisms by which they contribute to specific outcomes remain unclear. H3K4me3 is a prominent histone mark that is associated with active genes and promotes transcription through interactions with effector proteins that include initiation factor TFIID. We demonstrate that H3K4me3-TAF3 interactions direct global TFIID recruitment to active genes, some of which are p53 targets. Further analyses show that (i) H3K4me3 enhances p53-dependent transcription by stimulating preinitiation complex (PIC) formation; (ii) H3K4me3, through TAF3 interactions, can act either independently or cooperatively with the TATA box to direct PIC formation and transcription; and (iii) H3K4me3-TAF3/TFIID interactions regulate gene-selective functions of p53 in response to genotoxic stress. Our findings indicate a mechanism by which H3K4me3 directs PIC assembly for the rapid induction of specific p53 target genes Examination of TAF3, RNAPII, and H3K4me3 distribution in HCT116 cells.

ORGANISM(S): Homo sapiens

SUBMITTER: Xiaolin Wu 

PROVIDER: E-GEOD-43539 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

altmetric image

Publications

H3K4me3 interactions with TAF3 regulate preinitiation complex assembly and selective gene activation.

Lauberth Shannon M SM   Nakayama Takahiro T   Wu Xiaolin X   Ferris Andrea L AL   Tang Zhanyun Z   Hughes Stephen H SH   Roeder Robert G RG  

Cell 20130201 5


Histone modifications regulate chromatin-dependent processes, yet the mechanisms by which they contribute to specific outcomes remain unclear. H3K4me3 is a prominent histone mark that is associated with active genes and promotes transcription through interactions with effector proteins that include initiation factor TFIID. We demonstrate that H3K4me3-TAF3 interactions direct global TFIID recruitment to active genes, some of which are p53 targets. Further analyses show that (1) H3K4me3 enhances p  ...[more]

Similar Datasets

2013-03-02 | E-GEOD-43540 | biostudies-arrayexpress
2013-03-02 | E-GEOD-43541 | biostudies-arrayexpress
2013-03-02 | GSE43541 | GEO
2013-03-02 | GSE43540 | GEO
2013-03-02 | GSE43539 | GEO
2011-09-02 | E-GEOD-31270 | biostudies-arrayexpress
2011-09-02 | GSE31271 | GEO
2011-09-02 | GSE31270 | GEO
2014-05-22 | E-GEOD-52956 | biostudies-arrayexpress
2014-09-25 | E-GEOD-57807 | biostudies-arrayexpress