Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

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Gene expression in human fungal pathogen Coccidioides immitis changes as mycelia differentiate into spherules and mature


ABSTRACT: Coccidioides immitis (C. immitis) is a dimorphic fungus that causes disease in mammals including human beings. It grows as a mycelium in the soil but differentiates into a pathogenic structure called a spherule in the host. We compared the transcriptome of C. immitis mycelia and day 2 and day 8 spherules grown in vitro using a custom custom oligonucleotide microarray from Nimblegen. C. immitis RS strain isolated from infected mice was grown on agar. Arthroconidia was harvested and inoculated into mycelial spores. RNA was extracted from spores at different days post-inoculation and hybridized to a custom Nimblegen array, in order to identify differentially expressed genes between mycelia and spherules.

ORGANISM(S): Coccidioides immitis RS

SUBMITTER: Akul Singhania 

PROVIDER: E-GEOD-44225 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Publications

Gene expression in human fungal pathogen Coccidioides immitis changes as arthroconidia differentiate into spherules and mature.

Viriyakosol Suganya S   Singhania Akul A   Fierer Joshua J   Goldberg Jonathan J   Kirkland Theo N TN   Woelk Christopher H CH  

BMC microbiology 20130528


<h4>Background</h4>Coccidioides immitis is a dimorphic fungus that causes disease in mammals, including human beings. It grows as a mycelium containing arthroconidia in the soil and in the host arthroconidia differentiates into a unique structure called a spherule. We used a custom open reading frame oligonucleotide microarray to compare the transcriptome of C. immitis mycelia with early (day 2) and late stage (day 8) spherules grown in vitro. All hybridizations were done in quadruplicate and st  ...[more]

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