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Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

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STOP2 activated transcription in the stop1-mutant: STOP2-complemented lines (stop1-mutant with transformed STOP2) vs. stop1-mutant of Arabidopsis

ABSTRACT: Transcriptional profiling of genes recoverd by STOP2-complementation in the stop1-mutant (STOP2 expression is repressed in the stop1-mutant). The roots were exposed to Al and low pH stressed conditions, then genes recovered expression were analyzed. Goal is identifying the genes can be actevated the expression by STOP2. Two-condition experiment, STOP2-complemented lines (stop1-mutant backgoround) v.s. stop1-mutant. Biological replicates: 3 of low pH treatments replicates, 3 Al treatment replicates.

ORGANISM(S): Arabidopsis thaliana

SUBMITTER: Yuriko Kobayashi

PROVIDER: E-GEOD-45017 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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STOP2 activates transcription of several genes for Al- and low pH-tolerance that are regulated by STOP1 in Arabidopsis.

Kobayashi Yuriko Y Ohyama Yoshinao Y Kobayashi Yasufumi Y Ito Hiroki H Iuchi Satoshi S Fujita Miki M Zhao Cheng-Ri CR Tanveer Tazib T Ganesan Markkandan M Kobayashi Masatomo M Koyama Hiroyuki H

Molecular plant 20130810 2

The zinc-finger protein STOP1 (sensitive to proton rhizotoxicity 1) regulates transcription of multiple genes critical for tolerance to aluminum (Al) and low pH in Arabidopsis. We evaluated the contributions of genes that are suppressed in the stop1 mutant to Al- and low pH-tolerance using T-DNA-inserted disruptants, and transgenic stop1 mutants expressing each of the suppressed genes. STOP2, a STOP1 homolog, partially recovered Al- and low pH-tolerance by recovering the expression of genes regu ...[more]

PMID: 23935008

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