Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

Nuclesome Distribution data for KSHV reactivation


ABSTRACT: iSLK.219 cells at 0, 6, 12, 24, and 48 hours post KSHV reactivation. Nucleosome occupancy plays a key role in regulating access to the eukaryotic genomes. Although various chromatin regulatory complexes are known to regulate nucleosome occupancy, the role of DNA sequence in this regulation remains unclear, particularly in mammals. To address this problem, we measured nucleosome distribution at high temporal resolution in human cells at hundreds of genes during the reactivation of KaposiM-bM-^@M-^Ys sarcoma-associated herpesvirus (KSHV). We show that nucleosome redistribution peaks at 24 hours post KSHV reactivation and that the nucleosomal redistributions are widespread and transient. To clarify the role of DNA sequence in these nucleosomal redistributions, we compared the genes with a

ORGANISM(S): Homo sapiens

SUBMITTER: Jonathan Dennis 

PROVIDER: E-GEOD-52453 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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