Chickpea Transcriptome Atlas II - Abiotic Stress

ABSTRACT: In this study, we aim to present a global view of transcriptome dynamics during various abiotic stresses in chickpea. We generated about 252 million high-quality reads from eight libraries (control, desiccation, salinity and cold stress samples for roots and shoots) using Illumina high-throughput sequencing GAII platform. We mapped the reads to the desi chickpea genome for estimation of their transcript abundance in different tissue samples. The transcriptome dynamics was studied by differential gene expression analyses between stress treatment and control sample. We collected different tissue samples (root and shoot tissues of 10-day-old seedlings subjected to control (kept in water), desiccation (transferred on folds of tissue paper), salinity (transferred to beaker containing 150 mM NaC

ORGANISM(S): Cicer arietinum

SUBMITTER: Mukesh Jain 

PROVIDER: E-GEOD-53711 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress