Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

0

Identification of MAML2 regulated transcriptional program in HSY cells


ABSTRACT: Mucoepidermoid carcinomas (MEC) is the most common salivary gland malignancy. To date, advanced and nonresectable MEC have poor prognosis and no effective treatment. The CRTC1-MAML2 fusion oncogene, which is associated with more than 50% of MEC, consists of the N-terminal CREB-binding domain of the CREB transcriptional co-activator CRTC1 and the C-terminal transcriptional activation domain of the Notch transcriptional co-activator MAML2. CRTC1-MAML2 fusion was found to interact with CREB and constitutively activate their transcriptional targets. To investigate the genes and pathways regulated by CRTC1-MAML2 fusion oncogene, gene expression profiling analysis were performed in human fusion-positive MEC cells before and after knockdown of both CRTC1-MAML2 and MAML2 as well as in human fusion-negative salivary gland cancer cells before and after MAML2 knockdown only. This study revealed specific transcriptional program induced by the CRTC1-MAML2 fusion oncogene, which potentially mediates CRC1-MAML2 functions in MEC initiation and maintenance. The information will be useful for developing new approaches to block CRTC1-MAML2 fusion-expressing MEC. The fusion-negative HSY parotid adenocarcinoma cells were used in this study. The MAML2 knockdown was performed with two biological replicates for each group. We utilized pSuperRetro-based retroviruses that express shRNA targeting the MAML2 TAD as well as GFP, and the retroviruses express shRNA targeting luciferase gene (shLuc) and GFP for the control. Cells were infected with retroviruses and cultured for 72 hours. FACS sorting was performed to obtain GFP-positive cells and thus enrich shRNA-expressing cells. RNA was subsequently harvested for microarray analysis. The shMAML2 retroviruses caused MAML2 knockdown in fusion-negative HSY cells.

ORGANISM(S): Homo sapiens

SUBMITTER: Jian-Liang Li 

PROVIDER: E-GEOD-57022 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

altmetric image

Publications

Gene expression profiling analysis of CRTC1-MAML2 fusion oncogene-induced transcriptional program in human mucoepidermoid carcinoma cells.

Chen Jie J   Li Jian-Liang JL   Chen Zirong Z   Griffin James D JD   Wu Lizi L  

BMC cancer 20151026


<h4>Background</h4>Mucoepidermoid carcinoma (MEC) arises from multiple organs and accounts for the most common types of salivary gland malignancies. Currently, patients with unresectable and metastatic MEC have poor long-term clinical outcomes and no targeted therapies are available. The majority of MEC tumors contain a t(11;19) chromosomal translocation that fuses two genes, CRTC1 and MAML2, to generate the chimeric protein CRTC1-MAML2. CRTC1-MAML2 displays transforming activity in vitro and is  ...[more]

Similar Datasets

2014-04-21 | E-GEOD-46580 | biostudies-arrayexpress
2014-04-21 | GSE46580 | GEO
2015-10-30 | GSE57022 | GEO
2015-10-30 | E-GEOD-49673 | biostudies-arrayexpress
2015-10-30 | GSE49673 | GEO
2024-05-10 | GSE143264 | GEO
| PRJNA256213 | ENA
2012-12-31 | GSE36282 | GEO
2012-12-31 | E-GEOD-36282 | biostudies-arrayexpress
| PRJNA201048 | ENA