Transcriptome profiles in compatible and incompatible interactions between soybean and Fusarium oxysporum

ABSTRACT: Fusarium oxysporum is one of the most common species causing soybean root rot and seedling blight in the U.S. In a recent study, significant variation in aggressiveness was observed among isolates of F. oxysporum collected from roots in Iowa, ranging from highly pathogenic to weakly or non-pathogenic isolates. In the present work, a RNA-seq-based analysis was used for the first time to investigate the molecular aspect of the interaction of a partially resistant soybean genotype with non-pathogenic/pathogenic isolates of F. oxysporum at 72 and 96 hours post inoculation (hpi). Markedly different gene expression profiles were observed in compatible and incompatible host-pathogen combinations. A peak of differentially expressed genes (DEGs) was observed at 72 hpi in soybean roots in response t

ORGANISM(S): Glycine max

SUBMITTER: Alessandra Lanubile 

PROVIDER: E-GEOD-66861 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress