Transcriptome profiling of Arabian horses blood during training regime

ABSTRACT: Purpose: Next-generation sequencing (NGS) was used to select genes potentially associated with exercise adaptation in Arabian horses. Methods: Whole transcriptome profiling of blood was performed for untrained horses and horses from which samples were collected during at 3 different periods of training procedure (T1-during intense training period - March, T2- before starts - May and T3 -after flat racing season - October). The muscle transcriptome sequencing was performed for 37 blood samples using Illumina HiScan SQ in 75 single-end cycles. The quantifying transcript abundances was made using the RSEM supported by STAR aligner. The raw reads were aligned to the Equus caballus reference genome. Differentially expressed genes in blood tissue were detected by DESeq2. The RNA-seq results we

ORGANISM(S): Equus caballus

SUBMITTER: Kacper Zukowski 

PROVIDER: E-GEOD-83404 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress