Browse
Submit Data
Databases
API
Help

Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

14 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

MiRNA profile of five hematopoietic cell lines

ABSTRACT: We characterized the global microRNA expression of five commonly used hematopoietic cell lines: Kasumi-1, REH, U-937, BV-173 and ME-1. RNA samples from all five cell lines were compared to reference material composed of RNA from 20 different tissues

ORGANISM(S): Homo sapiens

SUBMITTER: Christopher Veigaard

PROVIDER: E-MEXP-3944 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

ACCESS DATA

Json Xml

Similar Datasets

MicroRNA profiling of mouse embryo gonad during the critical period of sex determination

Project description:Expression profiling of micro RNAs in mouse embryonic gonads before (11.5 days post coitum) and after (13.5 days post coitum) the critical period of sex determination

2012-05-11 | E-MEXP-2252 | biostudies-arrayexpress

MicroRNA profiling by array of mouse bleomycin induced lung fibrosis

Project description:mouse lung fibrosis model was established. Total RNA from mouse lungs was isolated. miRNA array analysis was performed.

2010-06-30 | E-MEXP-2749 | biostudies-arrayexpress

MicroRNA profiling of human peripheral blood leukocytes before and after stimulation with E. coli lipopolysaccharide

Project description:To gain insight into miRNAs involved in the regulation of the human innate immune response, we screened for differentially expressed miRNAs in circulating leukocytes in an in vivo model of acute inflammation triggered by E. coli lipopolysaccharide (LPS) infusion.<br>Leukocyte RNA was isolated from venous blood samples obtained from healthy male volunteers before and 4 hours after LPS-infusion. After fluorescence labeling, RNA samples were hybridized to microarrays containing capture probes for measuring the abundance<br>of more than 600 human miRNAs (Exiqon).

2008-12-01 | E-MEXP-1860 | biostudies-arrayexpress

MicroRNA profiling of human neuroblastoma cells shows MYCN-regulated MicroRNAs repress estrogen receptor-alpha expression

Project description:Effect of MYCN expression on microRNA transcriptome in human neuroblastoma.

2009-04-01 | E-MEXP-2006 | biostudies-arrayexpress

Expression of microRNAs and their target mRNAs in hESC-derived cardiomyocyte clusters and in heart tissue_microRNA_data

Project description:Parallel transcription profiling of cardiomyocyte clusters derived from human embryonic stem cells. Both mRNA (E-MEXP-2654) and miRNA (this experiment) transcription are measured and fetal and adult heart tissues are included as controls. This experiment was updated on 7th July 2011 to fix incorrect AH6 and FH3 files

2011-03-30 | E-MEXP-2655 | biostudies-arrayexpress

aCGH profil of five hematopoietic cell lines

Project description:We characterized the genomes of five commonly used hematopoietic cell lines: Kasumi-1, REH, U-937, BV-173 and ME-1. DNA samples from all five cell lines were compared to commercial sex-matched DNA.

2014-09-01 | E-MEXP-3949 | biostudies-arrayexpress

Estrogen regulation of microRNA in the zebrafish liver

Project description:Microarrays displaying zebrafish microRNA specific probes were hybridized using RNA samples originating from livers of male zebrafish exposed to 17-beta estradiol (E2) for 0, 24 and 48 hours.

2013-06-02 | E-MEXP-3866 | biostudies-arrayexpress

MicroRNA profiling of human precursor B-cell acute lymphoblastic leukemia cell line NALM-6 after trichostatin A treatment

Project description:Expression profile of miRNAs in NALM-6 cells were analyzed after TSA treatment for 6h, compared with non-treated cells.

2009-11-06 | E-MEXP-2047 | biostudies-arrayexpress

MicroRNA profiling of human cholangiocyte H69 cells after exposure to tumor necrosis factor-alpha

Project description:H69 cells (human cholangiocytes) were exposed to TNF-alpha (10 ng/ml) for 8 h and were then collected for miRNA analysis, compared with non-treated control cells.

2011-01-01 | E-MEXP-2049 | biostudies-arrayexpress

MicroRNA profiling of human cholangiocyte H69 cells after culturing with lipopolysaccharide

Project description:H69 cells were cultured in H69 medium with 1 ng/ml lipopolysaccharide(LPS, for smaples 04, 05 and 06) or without LPS(for samples 01, 02 and 03) for 8 hours and then collected for array analysis. <br>

2010-02-11 | E-MEXP-2052 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data