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Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

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Benchmarking brain organoid recapitulation of fetal corticogenesis

ABSTRACT: Brain organoids (BO) enabled the investigation of human corticogenesis in-vitro with an increasing range of protocols achieving its remarkable recapitulation. However, we lack a resource gathering fetal cortex-specific gene co-expression patterns and their behavior in BO. We complement the current knowledge with a benchmarking of BO versus human corticogenesis, integrating: transcriptomes from in-house differentiated cortical BO (CBO), in-house processed human fetal brain samples, analysis of transcriptomes from different BO systems and of pre-natal cortical samples from the BrainSpan Atlas.

INSTRUMENT(S): Illumina NovaSeq 6000

ORGANISM(S): Homo sapiens

SUBMITTER:

PROVIDER: E-MTAB-11239 | biostudies-arrayexpress |

SECONDARY ACCESSION(S): ERP134351

REPOSITORIES: biostudies-arrayexpress

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