RNA-seq of canine MDCK epithelial cell line compared to cell line overexpressing ERK2 or cell line with conditional activation of the ERK pathway

ABSTRACT: Using RNA-seq and canine MDCK epithelial cells, we analyzed mRNA expression profiles of cells overexpressing ERK2 and cells where the ERK pathway was activated for 24 hrs. For this purpose, three cell lines were used: parental MDCK cells, MDCK cells overexpressing FLAG-ERK2 or MDCK cells expressing conditionally active Raf protein (ΔRaf1:ER). Activation of the ERK pathways was achieved by the addition of 4-Hydroxytamoxifen that converts ΔRaf1:ER protein to the active form and it subsequently activates the ERK pathway.

INSTRUMENT(S): Illumina HiSeq 2000

ORGANISM(S): Canis lupus familiaris

SUBMITTER: Jan Rasl 

PROVIDER: E-MTAB-12132 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress