Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

0

Lotus japonicus-Pto DC3000 infection


ABSTRACT: Lotus japonicus is a model legume broadly used to study transcriptome regulation under different stress conditions and microorganism interaction. Understanding how this model plant protects itself against pathogens will certainly help to develop more tolerant cultivars in economically important Lotus species as well as in other legumes. In order to uncover the most important defense mechanisms activated upon bacterial attack, we explored by microarray analysis the transcriptome regulation occurring in the phenotypically contrasting ecotypes MG-20 and Gifu B-129 of L. japonicus after inoculation with the non-pathogenic strain Pseudomonas syringae DC3000 pv. tomato.

ORGANISM(S): Lotus japonicus

SUBMITTER: Andres Garriz 

PROVIDER: E-MTAB-2000 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

altmetric image

Publications

Defense responses in two ecotypes of Lotus japonicus against non-pathogenic Pseudomonas syringae.

Bordenave Cesar D CD   Escaray Francisco J FJ   Menendez Ana B AB   Serna Eva E   Carrasco Pedro P   Ruiz Oscar A OA   Gárriz Andrés A  

PloS one 20131211 12


Lotus japonicus is a model legume broadly used to study many important processes as nitrogen fixing nodule formation and adaptation to salt stress. However, no studies on the defense responses occurring in this species against invading microorganisms have been carried out at the present. Understanding how this model plant protects itself against pathogens will certainly help to develop more tolerant cultivars in economically important Lotus species as well as in other legumes. In order to uncove  ...[more]

Similar Datasets

2014-03-25 | E-MTAB-2418 | biostudies-arrayexpress
2016-12-01 | GSE73069 | GEO
| PRJNA498060 | ENA
2011-09-15 | E-GEOD-31739 | biostudies-arrayexpress
2011-09-16 | GSE31739 | GEO
2011-09-16 | GSE31739 | GEO
2017-06-01 | GSE78767 | GEO
| PRJNA498068 | ENA
2019-12-31 | GSE129778 | GEO
| PRJNA13205 | ENA