ChIP-chip by array of zebra fish hepatocellular carcinoma and normal liver to detect differences in CG island methylation

ABSTRACT: The aim of the experiment was to detect differences in CG island methylation between hepatocellular carcinoma and normal liver in zebrafish. Zebrafish were treated with DMBA, producing hepatocellular carcinoma, genomic DNA was prepared from these and control zebrafish livers. Methylated DNA was immunoprecipitated from HCC and control samples and labeled with Cy5, samples were co-hybridised with Cy3 labeled zebrafish genomic DNA to the Birmingham D. rerio Agilent 025794 45220 v1 microarray.

ORGANISM(S): Danio rerio

DISEASE(S): normal

SUBMITTER: Tim Williams 

PROVIDER: E-MTAB-209 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress