Ontology highlight
ABSTRACT:
SUBMITTER: Castelan-Sanchez HG
PROVIDER: S-EPMC10431917 | biostudies-literature | 2023 Jul
REPOSITORIES: biostudies-literature
Castelán-Sánchez Hugo G HG Delaye Luis L Inward Rhys P D RPD Dellicour Simon S Gutierrez Bernardo B Martinez de la Vina Natalia N Boukadida Celia C Pybus Oliver G OG de Anda Jáuregui Guillermo G Guzmán Plinio P Flores-Garrido Marisol M Fontanelli Óscar Ó Hernández Rosales Maribel M Meneses Amilcar A Olmedo-Alvarez Gabriela G Herrera-Estrella Alfredo Heriberto AH Sánchez-Flores Alejandro A Muñoz-Medina José Esteban JE Comas-García Andreu A Gómez-Gil Bruno B Zárate Selene S Taboada Blanca B López Susana S Arias Carlos F CF Kraemer Moritz U G MUG Lazcano Antonio A Escalera Zamudio Marina M
eLife 20230727
Over 200 different SARS-CoV-2 lineages have been observed in Mexico by November 2021. To investigate lineage replacement dynamics, we applied a phylodynamic approach and explored the evolutionary trajectories of five dominant lineages that circulated during the first year of local transmission. For most lineages, peaks in sampling frequencies coincided with different epidemiological waves of infection in Mexico. Lineages B.1.1.222 and B.1.1.519 exhibited similar dynamics, constituting clades tha ...[more]