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Autoimmunity and immunodeficiency associated with monoallelic LIG4 mutations via haploinsufficiency.


ABSTRACT:

Background

Biallelic mutations in LIG4 encoding DNA-ligase 4 cause a rare immunodeficiency syndrome manifesting as infant-onset life-threatening and/or opportunistic infections, skeletal malformations, radiosensitivity and neoplasia. LIG4 is pivotal during DNA repair and during V(D)J recombination as it performs the final DNA-break sealing step.

Objectives

This study explored whether monoallelic LIG4 missense mutations may underlie immunodeficiency and autoimmunity with autosomal dominant inheritance.

Methods

Extensive flow-cytometric immune-phenotyping was performed. Rare variants of immune system genes were analyzed by whole exome sequencing. DNA repair functionality and T-cell-intrinsic DNA damage tolerance was tested with an ensemble of in vitro and in silico tools. Antigen-receptor diversity and autoimmune features were characterized by high-throughput sequencing and autoantibody arrays. Reconstitution of wild-type versus mutant LIG4 were performed in LIG4 knockout Jurkat T cells, and DNA damage tolerance was subsequently assessed.

Results

A novel heterozygous LIG4 loss-of-function mutation (p.R580Q), associated with a dominantly inherited familial immune-dysregulation consisting of autoimmune cytopenias, and in the index patient with lymphoproliferation, agammaglobulinemia, and adaptive immune cell infiltration into nonlymphoid organs. Immunophenotyping revealed reduced naive CD4+ T cells and low TCR-Vα7.2+ T cells, while T-/B-cell receptor repertoires showed only mild alterations. Cohort screening identified 2 other nonrelated patients with the monoallelic LIG4 mutation p.A842D recapitulating clinical and immune-phenotypic dysregulations observed in the index family and displaying T-cell-intrinsic DNA damage intolerance. Reconstitution experiments and molecular dynamics simulations categorize both missense mutations as loss-of-function and haploinsufficient.

Conclusions

This study provides evidence that certain monoallelic LIG4 mutations may cause human immune dysregulation via haploinsufficiency.

SUBMITTER: Jauch AJ 

PROVIDER: S-EPMC10529397 | biostudies-literature | 2023 Aug

REPOSITORIES: biostudies-literature

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Autoimmunity and immunodeficiency associated with monoallelic LIG4 mutations via haploinsufficiency.

Jauch Annaïse J AJ   Bignucolo Olivier O   Seki Sayuri S   Ghraichy Marie M   Delmonte Ottavia M OM   von Niederhäusern Valentin V   Higgins Rebecca R   Ghosh Adhideb A   Nishizawa Masako M   Tanaka Mariko M   Baldrich Adrian A   Köppen Julius J   Hirsiger Julia R JR   Hupfer Robin R   Ehl Stephan S   Rensing-Ehl Anne A   Hopfer Helmut H   Prince Spasenija Savic SS   Daley Stephen R SR   Marquardsen Florian A FA   Meyer Benedikt J BJ   Tamm Michael M   Daikeler Thomas D TD   Diesch Tamara T   Kühne Thomas T   Helbling Arthur A   Berkemeier Caroline C   Heijnen Ingmar I   Navarini Alexander A AA   Trück Johannes J   de Villartay Jean-Pierre JP   Oxenius Annette A   Berger Christoph T CT   Hess Christoph C   Notarangelo Luigi D LD   Yamamoto Hiroyuki H   Recher Mike M  

The Journal of allergy and clinical immunology 20230331 2


<h4>Background</h4>Biallelic mutations in LIG4 encoding DNA-ligase 4 cause a rare immunodeficiency syndrome manifesting as infant-onset life-threatening and/or opportunistic infections, skeletal malformations, radiosensitivity and neoplasia. LIG4 is pivotal during DNA repair and during V(D)J recombination as it performs the final DNA-break sealing step.<h4>Objectives</h4>This study explored whether monoallelic LIG4 missense mutations may underlie immunodeficiency and autoimmunity with autosomal  ...[more]

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