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Super-enhancer hijacking drives ectopic expression of hedgehog pathway ligands in meningiomas.


ABSTRACT: Hedgehog signaling mediates embryologic development of the central nervous system and other tissues and is frequently hijacked by neoplasia to facilitate uncontrolled cellular proliferation. Meningiomas, the most common primary brain tumor, exhibit Hedgehog signaling activation in 6.5% of cases, triggered by recurrent mutations in pathway mediators such as SMO. In this study, we find 35.6% of meningiomas that lack previously known drivers acquired various types of somatic structural variations affecting chromosomes 2q35 and 7q36.3. These cases exhibit ectopic expression of Hedgehog ligands, IHH and SHH, respectively, resulting in Hedgehog signaling activation. Recurrent tandem duplications involving IHH permit de novo chromatin interactions between super-enhancers within DIRC3 and a locus containing IHH. Our work expands the landscape of meningioma molecular drivers and demonstrates enhancer hijacking of Hedgehog ligands as a route to activate this pathway  in neoplasia.

SUBMITTER: Youngblood MW 

PROVIDER: S-EPMC10560290 | biostudies-literature | 2023 Oct

REPOSITORIES: biostudies-literature

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Super-enhancer hijacking drives ectopic expression of hedgehog pathway ligands in meningiomas.

Youngblood Mark W MW   Erson-Omay Zeynep Z   Li Chang C   Najem Hinda H   Coșkun Süleyman S   Tyrtova Evgeniya E   Montejo Julio D JD   Miyagishima Danielle F DF   Barak Tanyeri T   Nishimura Sayoko S   Harmancı Akdes Serin AS   Clark Victoria E VE   Duran Daniel D   Huttner Anita A   Avşar Timuçin T   Bayri Yasar Y   Schramm Johannes J   Boetto Julien J   Peyre Matthieu M   Riche Maximilien M   Goldbrunner Roland R   Amankulor Nduka N   Louvi Angeliki A   Bilgüvar Kaya K   Pamir M Necmettin MN   Özduman Koray K   Kilic Türker T   Knight James R JR   Simon Matthias M   Horbinski Craig C   Kalamarides Michel M   Timmer Marco M   Heimberger Amy B AB   Mishra-Gorur Ketu K   Moliterno Jennifer J   Yasuno Katsuhito K   Günel Murat M  

Nature communications 20231007 1


Hedgehog signaling mediates embryologic development of the central nervous system and other tissues and is frequently hijacked by neoplasia to facilitate uncontrolled cellular proliferation. Meningiomas, the most common primary brain tumor, exhibit Hedgehog signaling activation in 6.5% of cases, triggered by recurrent mutations in pathway mediators such as SMO. In this study, we find 35.6% of meningiomas that lack previously known drivers acquired various types of somatic structural variations a  ...[more]

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