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Variations in the G6PC2/ABCB11 genomic region are associated with fasting glucose levels.


ABSTRACT: Identifying the genetic variants that regulate fasting glucose concentrations may further our understanding of the pathogenesis of diabetes. We therefore investigated the association of fasting glucose levels with SNPs in 2 genome-wide scans including a total of 5,088 nondiabetic individuals from Finland and Sardinia. We found a significant association between the SNP rs563694 and fasting glucose concentrations (P = 3.5 x 10(-7)). This association was further investigated in an additional 18,436 nondiabetic individuals of mixed European descent from 7 different studies. The combined P value for association in these follow-up samples was 6.9 x 10(-26), and combining results from all studies resulted in an overall P value for association of 6.4 x 10(-33). Across these studies, fasting glucose concentrations increased 0.01-0.16 mM with each copy of the major allele, accounting for approximately 1% of the total variation in fasting glucose. The rs563694 SNP is located between the genes glucose-6-phosphatase catalytic subunit 2 (G6PC2) and ATP-binding cassette, subfamily B (MDR/TAP), member 11 (ABCB11). Our results in combination with data reported in the literature suggest that G6PC2, a glucose-6-phosphatase almost exclusively expressed in pancreatic islet cells, may underlie variation in fasting glucose, though it is possible that ABCB11, which is expressed primarily in liver, may also contribute to such variation.

SUBMITTER: Chen WM 

PROVIDER: S-EPMC2398737 | biostudies-literature | 2008 Jul

REPOSITORIES: biostudies-literature

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Variations in the G6PC2/ABCB11 genomic region are associated with fasting glucose levels.

Chen Wei-Min WM   Erdos Michael R MR   Jackson Anne U AU   Saxena Richa R   Sanna Serena S   Silver Kristi D KD   Timpson Nicholas J NJ   Hansen Torben T   Orrù Marco M   Grazia Piras Maria M   Bonnycastle Lori L LL   Willer Cristen J CJ   Lyssenko Valeriya V   Shen Haiqing H   Kuusisto Johanna J   Ebrahim Shah S   Sestu Natascia N   Duren William L WL   Spada Maria Cristina MC   Stringham Heather M HM   Scott Laura J LJ   Olla Nazario N   Swift Amy J AJ   Najjar Samer S   Mitchell Braxton D BD   Lawlor Debbie A DA   Smith George Davey GD   Ben-Shlomo Yoav Y   Andersen Gitte G   Borch-Johnsen Knut K   Jørgensen Torben T   Saramies Jouko J   Valle Timo T TT   Buchanan Thomas A TA   Shuldiner Alan R AR   Lakatta Edward E   Bergman Richard N RN   Uda Manuela M   Tuomilehto Jaakko J   Pedersen Oluf O   Cao Antonio A   Groop Leif L   Mohlke Karen L KL   Laakso Markku M   Schlessinger David D   Collins Francis S FS   Altshuler David D   Abecasis Gonçalo R GR   Boehnke Michael M   Scuteri Angelo A   Watanabe Richard M RM  

The Journal of clinical investigation 20080701 7


Identifying the genetic variants that regulate fasting glucose concentrations may further our understanding of the pathogenesis of diabetes. We therefore investigated the association of fasting glucose levels with SNPs in 2 genome-wide scans including a total of 5,088 nondiabetic individuals from Finland and Sardinia. We found a significant association between the SNP rs563694 and fasting glucose concentrations (P = 3.5 x 10(-7)). This association was further investigated in an additional 18,436  ...[more]

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