Unknown

Dataset Information

0

Immune profile and mitotic index of metastatic melanoma lesions enhance clinical staging in predicting patient survival.


ABSTRACT: Although remission rates for metastatic melanoma are generally very poor, some patients can survive for prolonged periods following metastasis. We used gene expression profiling, mitotic index (MI), and quantification of tumor infiltrating leukocytes (TILs) and CD3+ cells in metastatic lesions to search for a molecular basis for this observation and to develop improved methods for predicting patient survival. We identified a group of 266 genes associated with postrecurrence survival. Genes positively associated with survival were predominantly immune response related (e.g., ICOS, CD3d, ZAP70, TRAT1, TARP, GZMK, LCK, CD2, CXCL13, CCL19, CCR7, VCAM1) while genes negatively associated with survival were cell proliferation related (e.g., PDE4D, CDK2, GREF1, NUSAP1, SPC24). Furthermore, any of the 4 parameters (prevalidated gene expression signature, TILs, CD3, and in particular MI) improved the ability of Tumor, Node, Metastasis (TNM) staging to predict postrecurrence survival; MI was the most significant contributor (HR = 2.13, P = 0.0008). An immune response gene expression signature and presence of TILs and CD3+ cells signify immune surveillance as a mechanism for prolonged survival in these patients and indicate improved patient subcategorization beyond current TNM staging.

SUBMITTER: Bogunovic D 

PROVIDER: S-EPMC2787158 | biostudies-literature | 2009 Dec

REPOSITORIES: biostudies-literature

altmetric image

Publications

Immune profile and mitotic index of metastatic melanoma lesions enhance clinical staging in predicting patient survival.

Bogunovic Dusan D   O'Neill David W DW   Belitskaya-Levy Ilana I   Vacic Vladimir V   Yu Yi-Lo YL   Adams Sylvia S   Darvishian Farbod F   Berman Russell R   Shapiro Richard R   Pavlick Anna C AC   Lonardi Stefano S   Zavadil Jiri J   Osman Iman I   Bhardwaj Nina N  

Proceedings of the National Academy of Sciences of the United States of America 20091113 48


Although remission rates for metastatic melanoma are generally very poor, some patients can survive for prolonged periods following metastasis. We used gene expression profiling, mitotic index (MI), and quantification of tumor infiltrating leukocytes (TILs) and CD3+ cells in metastatic lesions to search for a molecular basis for this observation and to develop improved methods for predicting patient survival. We identified a group of 266 genes associated with postrecurrence survival. Genes posit  ...[more]

Similar Datasets

2009-11-30 | E-GEOD-19234 | biostudies-arrayexpress
| S-ECPF-GEOD-19234 | biostudies-other
2009-12-01 | GSE19234 | GEO
2015-06-26 | E-GEOD-62837 | biostudies-arrayexpress
| S-EPMC8081447 | biostudies-literature
2015-06-26 | GSE62837 | GEO
| S-ECPF-GEOD-38119 | biostudies-other
| S-EPMC9302506 | biostudies-literature
2013-12-31 | E-GEOD-38119 | biostudies-arrayexpress
2013-12-31 | E-GEOD-38137 | biostudies-arrayexpress