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Epistasis and Entropy.

ABSTRACT: Epistasis is a key concept in the theory of adaptation. Indicators of epistasis are of interest for large systems where systematic fitness measurements may not be possible. Some recent approaches depend on information theory. We show that considering shared entropy for pairs of loci can be misleading. The reason is that shared entropy does not imply epistasis for the pair. This observation holds true also in the absence of higher order epistasis. We discuss a method for reducing the number of false positives. However, our main conclusion is that entropy-based approaches have serious limitations in this context.

SUBMITTER: Crona K

PROVIDER: S-EPMC5178987 | biostudies-literature | 2016 Dec

REPOSITORIES: biostudies-literature

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Epistasis and Entropy.

Crona Kristina K

PLoS genetics 20161222 12

Epistasis is a key concept in the theory of adaptation. Indicators of epistasis are of interest for large systems where systematic fitness measurements may not be possible. Some recent approaches depend on information theory. We show that considering shared entropy for pairs of loci can be misleading. The reason is that shared entropy does not imply epistasis for the pair. This observation holds true also in the absence of higher order epistasis. We discuss a method for reducing the number of fa ...[more]

PMID: 28005911

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