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Identification of a novel mtDNA lineage B3 in chicken (Gallus gallus domesticus).

ABSTRACT: In this study, we sequenced the complete mitochondrial DNA genome (mitogenome) of the Zhengyang Yellow chicken (Gallus gallus domesticus) by next-generation sequencing technology. Samples were taken from Zhumadian city, Henan Province, China. The complete mitogenome was 16 785 bp in size, and had a nucleotide composition of 30.3% (A), 23.7% (T), 32.5% (C), and 13.5% (G), with a high AT content of 54.0%. The assembled mitogenome exhibited typical mitochondrial DNA (mtDNA) structure, including a non-coding control region, two rRNA genes, 13 protein-coding genes, and 22 tRNA genes. Phylogenetic analysis indicated that this mitogenome defined a novel sub-haplogroup B3 within haplogroup B. These results should provide essential information for chicken domestication and insight into the evolution of genomes.

SUBMITTER: Huang XH 

PROVIDER: S-EPMC5571479 | biostudies-literature | 2017 Jul

REPOSITORIES: biostudies-literature

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Identification of a novel mtDNA lineage B3 in chicken (<i>Gallus gallus domesticus</i>).

Huang Xun-He XH   Li Gui-Mei GM   Chen Xing X   Wu Ya-Jiang YJ   Li Wei-Na WN   Zhong Fu-Sheng FS   Wang Wen-Zhi WZ   Ding Zhao-Li ZL  

Zoological research 20170701 4

In this study, we sequenced the complete mitochondrial DNA genome (mitogenome) of the Zhengyang Yellow chicken (<i>Gallus gallus domesticus</i>) by next-generation sequencing technology. Samples were taken from Zhumadian city, Henan Province, China. The complete mitogenome was 16 785 bp in size, and had a nucleotide composition of 30.3% (A), 23.7% (T), 32.5% (C), and 13.5% (G), with a high AT content of 54.0%. The assembled mitogenome exhibited typical mitochondrial DNA (mtDNA) structure, includ  ...[more]

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