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Standing genetic variation as the predominant source for adaptation of a songbird.


ABSTRACT: What kind of genetic variation contributes the most to adaptation is a fundamental question in evolutionary biology. By resequencing genomes of 80 individuals, we inferred the origin of genomic variants associated with a complex adaptive syndrome involving multiple quantitative traits, namely, adaptation between high and low altitudes, in the vinous-throated parrotbill (Sinosuthora webbiana) in Taiwan. By comparing these variants with those in the Asian mainland population, we revealed standing variation in 24 noncoding genomic regions to be the predominant genetic source of adaptation. Parrotbills at both high and low altitudes exhibited signatures of recent selection, suggesting that not only the front but also the trailing edges of postglacial expanding populations could be subjected to environmental stresses. This study verifies and quantifies the importance of standing variation in adaptation in a cohort of genes, illustrating that the evolutionary potential of a population depends significantly on its preexisting genetic diversity. These findings provide important context for understanding adaptation and conservation of species in the Anthropocene.

SUBMITTER: Lai YT 

PROVIDER: S-EPMC6369788 | biostudies-literature | 2019 Feb

REPOSITORIES: biostudies-literature

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Standing genetic variation as the predominant source for adaptation of a songbird.

Lai Yu-Ting YT   Yeung Carol K L CKL   Omland Kevin E KE   Pang Er-Li EL   Hao Yu Y   Liao Ben-Yang BY   Cao Hui-Fen HF   Zhang Bo-Wen BW   Yeh Chia-Fen CF   Hung Chih-Ming CM   Hung Hsin-Yi HY   Yang Ming-Yu MY   Liang Wei W   Hsu Yu-Cheng YC   Yao Cheng-Te CT   Dong Lu L   Lin Kui K   Li Shou-Hsien SH  

Proceedings of the National Academy of Sciences of the United States of America 20190118 6


What kind of genetic variation contributes the most to adaptation is a fundamental question in evolutionary biology. By resequencing genomes of 80 individuals, we inferred the origin of genomic variants associated with a complex adaptive syndrome involving multiple quantitative traits, namely, adaptation between high and low altitudes, in the vinous-throated parrotbill (<i>Sinosuthora webbiana</i>) in Taiwan. By comparing these variants with those in the Asian mainland population, we revealed st  ...[more]

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