In silico analysis of the structural diversity and interactions between invertases and invertase inhibitors from potato (Solanum tuberosum L.).

ABSTRACT: We performed sequence diversity, phylogenetic profiling, 3D structure modelling and in silico interactions between invertases (cell wall/apoplastic and vacuolar) and invertase inhibitors (cell wall/apoplastic and vacuolar) from potato. Cloning and sequencing of invertase inhibitors was performed from different potato cultivars. The comparison of the protein sequences of the different isoforms of invertases and invertase inhibitors exhibited insertions and deletions as well as the variation in terms of amino acid residues. Furthermore, the phylogenetic tree analysis displayed two groups of invertase inhibitors corresponding to the cell wall/apoplast and vacuole. Using Phyre² protein homology recognition engine, it revealed that the structure of invertase inhibitors was predominan

SUBMITTER: Datir S 

PROVIDER: S-EPMC7096596 | biostudies-literature | 2020 Apr

REPOSITORIES: biostudies-literature