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The human tumor microbiome is composed of tumor type-specific intracellular bacteria.


ABSTRACT: Bacteria were first detected in human tumors more than 100 years ago, but the characterization of the tumor microbiome has remained challenging because of its low biomass. We undertook a comprehensive analysis of the tumor microbiome, studying 1526 tumors and their adjacent normal tissues across seven cancer types, including breast, lung, ovary, pancreas, melanoma, bone, and brain tumors. We found that each tumor type has a distinct microbiome composition and that breast cancer has a particularly rich and diverse microbiome. The intratumor bacteria are mostly intracellular and are present in both cancer and immune cells. We also noted correlations between intratumor bacteria or their predicted functions with tumor types and subtypes, patients' smoking status, and the response to immunotherapy.

SUBMITTER: Nejman D 

PROVIDER: S-EPMC7757858 | biostudies-literature | 2020 May

REPOSITORIES: biostudies-literature

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The human tumor microbiome is composed of tumor type-specific intracellular bacteria.

Nejman Deborah D   Livyatan Ilana I   Fuks Garold G   Gavert Nancy N   Zwang Yaara Y   Geller Leore T LT   Rotter-Maskowitz Aviva A   Weiser Roi R   Mallel Giuseppe G   Gigi Elinor E   Meltser Arnon A   Douglas Gavin M GM   Kamer Iris I   Gopalakrishnan Vancheswaran V   Dadosh Tali T   Levin-Zaidman Smadar S   Avnet Sofia S   Atlan Tehila T   Cooper Zachary A ZA   Arora Reetakshi R   Cogdill Alexandria P AP   Khan Md Abdul Wadud MAW   Ologun Gabriel G   Bussi Yuval Y   Weinberger Adina A   Lotan-Pompan Maya M   Golani Ofra O   Perry Gili G   Rokah Merav M   Bahar-Shany Keren K   Rozeman Elisa A EA   Blank Christian U CU   Ronai Anat A   Shaoul Ron R   Amit Amnon A   Dorfman Tatiana T   Kremer Ran R   Cohen Zvi R ZR   Harnof Sagi S   Siegal Tali T   Yehuda-Shnaidman Einav E   Gal-Yam Einav Nili EN   Shapira Hagit H   Baldini Nicola N   Langille Morgan G I MGI   Ben-Nun Alon A   Kaufman Bella B   Nissan Aviram A   Golan Talia T   Dadiani Maya M   Levanon Keren K   Bar Jair J   Yust-Katz Shlomit S   Barshack Iris I   Peeper Daniel S DS   Raz Dan J DJ   Segal Eran E   Wargo Jennifer A JA   Sandbank Judith J   Shental Noam N   Straussman Ravid R  

Science (New York, N.Y.) 20200501 6494


Bacteria were first detected in human tumors more than 100 years ago, but the characterization of the tumor microbiome has remained challenging because of its low biomass. We undertook a comprehensive analysis of the tumor microbiome, studying 1526 tumors and their adjacent normal tissues across seven cancer types, including breast, lung, ovary, pancreas, melanoma, bone, and brain tumors. We found that each tumor type has a distinct microbiome composition and that breast cancer has a particularl  ...[more]

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