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Transcriptional and morphological profiling of parvalbumin interneuron subpopulations in the mouse hippocampus.


ABSTRACT: The diversity reflected by >100 different neural cell types fundamentally contributes to brain function and a central idea is that neuronal identity can be inferred from genetic information. Recent large-scale transcriptomic assays seem to confirm this hypothesis, but a lack of morphological information has limited the identification of several known cell types. In this study, we used single-cell RNA-seq in morphologically identified parvalbumin interneurons (PV-INs), and studied their transcriptomic states in the morphological, physiological, and developmental domains. Overall, we find high transcriptomic similarity among PV-INs, with few genes showing divergent expression between morphologically different types. Furthermore, PV-INs show a uniform synaptic cell adhesion molecule (CAM) profile, suggesting that CAM expression in mature PV cells does not reflect wiring specificity after development. Together, our results suggest that while PV-INs differ in anatomy and in vivo activity, their continuous transcriptomic and homogenous biophysical landscapes are not predictive of these distinct identities.

SUBMITTER: Que L 

PROVIDER: S-EPMC7782706 | biostudies-literature | 2021 Jan

REPOSITORIES: biostudies-literature

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Transcriptional and morphological profiling of parvalbumin interneuron subpopulations in the mouse hippocampus.

Que Lin L   Lukacsovich David D   Luo Wenshu W   Földy Csaba C  

Nature communications 20210104 1


The diversity reflected by >100 different neural cell types fundamentally contributes to brain function and a central idea is that neuronal identity can be inferred from genetic information. Recent large-scale transcriptomic assays seem to confirm this hypothesis, but a lack of morphological information has limited the identification of several known cell types. In this study, we used single-cell RNA-seq in morphologically identified parvalbumin interneurons (PV-INs), and studied their transcrip  ...[more]

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