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Next-generation sequencing yields the complete mitogenome of Caridina multidentata and phylogenetic analysis.

ABSTRACT: In this study, the complete mitochondrial genome (mitogenome) of Caridina multidentata is reported for the first time. These data demonstrate that the C. multidentata mitochondrial genome is a 15,825?bp circular molecule and encodes the typical 37 metazoan mitochondrial genes [13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs), two ribosomal RNA genes (rRNAs)] and an A?+?T-rich control region. The genome composition was highly A?+?T biased 63.45% and showed negative AT-skew (-0.131) and slightly possitive GC-skew (0.018). The complete mitogenome provides essential and important DNA molecular data for further phylogenetic and evolutionary analysis for shrimps.

SUBMITTER: Wang Z 

PROVIDER: S-EPMC7799520 | biostudies-literature | 2018 Jan

REPOSITORIES: biostudies-literature

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Next-generation sequencing yields the complete mitogenome of <i>Caridina multidentata</i> and phylogenetic analysis.

Wang Zhengfei Z   Wu Qiong Q   Guo Huayun H   Tang Dan D   Bai Yuze Y   Wang Ziqian Z   Tao Yitao Y  

Mitochondrial DNA. Part B, Resources 20180103 1

In this study, the complete mitochondrial genome (mitogenome) of <i>Caridina multidentata</i> is reported for the first time. These data demonstrate that the <i>C. multidentata</i> mitochondrial genome is a 15,825 bp circular molecule and encodes the typical 37 metazoan mitochondrial genes [13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs), two ribosomal RNA genes (rRNAs)] and an A + T-rich control region. The genome composition was highly A + T biased 63.45% and showed negative AT-s  ...[more]

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