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High-efficiency delivery of CRISPR-Cas9 by engineered probiotics enables precise microbiome editing.

ABSTRACT: Antibiotic resistance threatens our ability to treat infectious diseases, spurring interest in alternative antimicrobial technologies. The use of bacterial conjugation to deliver CRISPR-cas systems programmed to precisely eliminate antibiotic-resistant bacteria represents a promising approach but requires high in situ DNA transfer rates. We have optimized the transfer efficiency of conjugative plasmid TP114 using accelerated laboratory evolution. We hence generated a potent conjugative delivery vehicle for CRISPR-cas9 that can eliminate > 99.9% of targeted antibiotic-resistant Escherichia coli in the mouse gut microbiota using a single dose. We then applied this system to a Citrobacter rodentium infection model, achieving full clearance within four consecutive days of treatment.

SUBMITTER: Neil K

PROVIDER: S-EPMC8527022 | biostudies-literature | 2021 Oct

REPOSITORIES: biostudies-literature

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High-efficiency delivery of CRISPR-Cas9 by engineered probiotics enables precise microbiome editing.

Neil Kevin K Allard Nancy N Roy Patricia P Grenier Frédéric F Menendez Alfredo A Burrus Vincent V Rodrigue Sébastien S

Molecular systems biology 20211001 10

Antibiotic resistance threatens our ability to treat infectious diseases, spurring interest in alternative antimicrobial technologies. The use of bacterial conjugation to deliver CRISPR-cas systems programmed to precisely eliminate antibiotic-resistant bacteria represents a promising approach but requires high in situ DNA transfer rates. We have optimized the transfer efficiency of conjugative plasmid TP114 using accelerated laboratory evolution. We hence generated a potent conjugative delivery ...[more]

PMID: 34665940

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