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Comparative transmissibility of SARS-CoV-2 variants Delta and Alpha in New England, USA.


ABSTRACT: The SARS-CoV-2 Delta variant rose to dominance in mid-2021, likely propelled by an estimated 40%-80% increased transmissibility over Alpha. To investigate if this ostensible difference in transmissibility is uniform across populations, we partner with public health programs from all six states in New England in the United States. We compare logistic growth rates during each variant's respective emergence period, finding that Delta emerged 1.37-2.63 times faster than Alpha (range across states). We compute variant-specific effective reproductive numbers, estimating that Delta is 63%-167% more transmissible than Alpha (range across states). Finally, we estimate that Delta infections generate on average 6.2 (95% CI 3.1-10.9) times more viral RNA copies per milliliter than Alpha infections during their respective emergence. Overall, our evidence suggests that Delta's enhanced transmissibility can be attributed to its innate ability to increase infectiousness, but its epidemiological dynamics may vary depending on underlying population attributes and sequencing data availability.

SUBMITTER: Earnest R 

PROVIDER: S-EPMC8913280 | biostudies-literature | 2022 Apr

REPOSITORIES: biostudies-literature

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Comparative transmissibility of SARS-CoV-2 variants Delta and Alpha in New England, USA.

Earnest Rebecca R   Uddin Rockib R   Matluk Nicholas N   Renzette Nicholas N   Turbett Sarah E SE   Siddle Katherine J KJ   Loreth Christine C   Adams Gordon G   Tomkins-Tinch Christopher H CH   Petrone Mary E ME   Rothman Jessica E JE   Breban Mallery I MI   Koch Robert Tobias RT   Billig Kendall K   Fauver Joseph R JR   Vogels Chantal B F CBF   Bilguvar Kaya K   De Kumar Bony B   Landry Marie L ML   Peaper David R DR   Kelly Kevin K   Omerza Greg G   Grieser Heather H   Meak Sim S   Martha John J   Dewey Hannah B HB   Kales Susan S   Berenzy Daniel D   Carpenter-Azevedo Kristin K   King Ewa E   Huard Richard C RC   Novitsky Vlad V   Howison Mark M   Darpolor Josephine J   Manne Akarsh A   Kantor Rami R   Smole Sandra C SC   Brown Catherine M CM   Fink Timelia T   Lang Andrew S AS   Gallagher Glen R GR   Pitzer Virginia E VE   Sabeti Pardis C PC   Gabriel Stacey S   MacInnis Bronwyn L BL   Tewhey Ryan R   Adams Mark D MD   Park Daniel J DJ   Lemieux Jacob E JE   Grubaugh Nathan D ND  

Cell reports. Medicine 20220311 4


The SARS-CoV-2 Delta variant rose to dominance in mid-2021, likely propelled by an estimated 40%-80% increased transmissibility over Alpha. To investigate if this ostensible difference in transmissibility is uniform across populations, we partner with public health programs from all six states in New England in the United States. We compare logistic growth rates during each variant's respective emergence period, finding that Delta emerged 1.37-2.63 times faster than Alpha (range across states).  ...[more]

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