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Coronavirus Host Genetics South Africa (COHG-SA) database-a variant database for gene regions associated with SARS-CoV-2 outcomes.


ABSTRACT: The SARS-CoV-2 virus is responsible for the COVID-19 global public health emergency, and the disease it causes is highly variable in its clinical presentation. Clinical phenotypes are heterogeneous both in terms of presentation of symptoms in the host and response to therapy. Several studies and initiatives have been established to analyse and review host genetic epidemiology associated with COVID-19. Our research group curated these articles into a web-based database using the python application-server framework Django. The database provides a searchable research tool describing current literature surrounding COVID-19 host genetic factors associated with disease outcome. This paper describes the COHG-SA database and provides an overview of the analyses that can be derived from these data.

SUBMITTER: Barmania F 

PROVIDER: S-EPMC8960680 | biostudies-literature | 2022 Aug

REPOSITORIES: biostudies-literature

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Coronavirus Host Genetics South Africa (COHG-SA) database-a variant database for gene regions associated with SARS-CoV-2 outcomes.

Barmania Fatima F   Mellet Juanita J   Ryder Megan A MA   Ford Graeme G   Herd Candice L CL   Tamuhla Tsaone T   Hendricks Candice C   Giles Rachel R   Kalua Thumbiko T   Joubert Fourie F   Tiffin Nicki N   Pepper Michael S MS  

European journal of human genetics : EJHG 20220329 8


The SARS-CoV-2 virus is responsible for the COVID-19 global public health emergency, and the disease it causes is highly variable in its clinical presentation. Clinical phenotypes are heterogeneous both in terms of presentation of symptoms in the host and response to therapy. Several studies and initiatives have been established to analyse and review host genetic epidemiology associated with COVID-19. Our research group curated these articles into a web-based database using the python applicatio  ...[more]

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