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Subset of Fluorophores Is Responsible for Radiation Brightening in Viromimetic Particles.


ABSTRACT: In certain conditions, dye-conjugated icosahedral virus shells exhibit suppression of concentration quenching. The recently observed radiation brightening at high fluorophore densities has been attributed to coherent emission, i.e., to a cooperative process occurring within a subset of the virus-supported fluorophores. Until now, the distribution of fluorophores among potential conjugation sites and the nature of the active subset remained unknown. With the help of mass spectrometry and molecular dynamics simulations, we found which conjugation sites in the brome mosaic virus capsid are accessible to fluorophores. Reactive external surface lysines but also those at the lumenal interface where the coat protein N-termini are located showed virtually unrestricted access to dyes. The third type of labeled lysines was situated at the intercapsomeric interfaces. Through limited proteolysis of flexible N-termini, it was determined that dyes bound to them are unlikely to be involved in the radiation brightening effect. At the same time, specific labeling of genetically inserted cysteines on the exterior capsid surface alone did not lead to radiation brightening. The results suggest that lysines situated within the more rigid structural part of the coat protein provide the chemical environments conducive to radiation brightening, and we discuss some of the characteristics of these environments.

SUBMITTER: Anil Sushma A 

PROVIDER: S-EPMC9009136 | biostudies-literature | 2021 Sep

REPOSITORIES: biostudies-literature

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Subset of Fluorophores Is Responsible for Radiation Brightening in Viromimetic Particles.

Anil Sushma Arathi A   Zhao Bingqing B   Tsvetkova Irina B IB   Pérez-Segura Carolina C   Hadden-Perilla Jodi A JA   Reilly James P JP   Dragnea Bogdan B  

The journal of physical chemistry. B 20210910 37


In certain conditions, dye-conjugated icosahedral virus shells exhibit suppression of concentration quenching. The recently observed radiation brightening at high fluorophore densities has been attributed to coherent emission, <i>i.e.</i>, to a cooperative process occurring within a subset of the virus-supported fluorophores. Until now, the distribution of fluorophores among potential conjugation sites and the nature of the active subset remained unknown. With the help of mass spectrometry and m  ...[more]

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