Ontology highlight
ABSTRACT: Purpose
The study aimed to identify novel genes for idiopathic hypogonadotropic hypogonadism (IHH).Methods
A cohort of 1387 probands with IHH underwent exome sequencing and de novo, familial, and cohort-wide investigations. Functional studies were performed on 2 p190 Rho GTPase-activating proteins (p190 RhoGAP), ARHGAP35 and ARHGAP5, which involved in vivo modeling in larval zebrafish and an in vitro p190A-GAP activity assay.Results
Rare protein-truncating variants (PTVs; n = 5) and missense variants in the RhoGAP domain (n = 7) in ARHGAP35 were identified in IHH cases (rare variant enrichment: PTV [unadjusted P = 3.1E-06] and missense [adjusted P = 4.9E-03] vs controls). Zebrafish modeling using gnrh3:egfp phenotype assessment showed that mutant larvae with deficient arhgap35a, the predominant ARHGAP35 paralog in the zebrafish brain, display decreased GnRH3-GFP+ neuronal area, a readout for IHH. In vitro GAP activity studies showed that 1 rare missense variant [ARHGAP35 p.(Arg1284Trp)] had decreased GAP activity. Rare PTVs (n = 2) also were discovered in ARHGAP5, a paralog of ARHGAP35; however, arhgap5 zebrafish mutants did not display significant GnRH3-GFP+ abnormalities.Conclusion
This study identified ARHGAP35 as a new autosomal dominant genetic driver for IHH and ARHGAP5 as a candidate gene for IHH. These observations suggest a novel role for the p190 RhoGAP proteins in GnRH neuronal development and integrity.
SUBMITTER: Lippincott MF
PROVIDER: S-EPMC9730938 | biostudies-literature | 2022 Dec
REPOSITORIES: biostudies-literature
Lippincott Margaret F MF Xu Wanxue W Smith Abigail A AA Miao Xinyu X Lafont Agathe A Shennib Omar O Farley Gordon J GJ Sabbagh Riwa R Delaney Angela A Stamou Maria M Plummer Lacey L Salnikov Kathryn K Georgopoulos Neoklis A NA Mericq Veronica V Quinton Richard R Mau-Them Frederic Tran FT Nambot Sophie S Hamad Asma A Brittain Helen H Tooze Rebecca S RS Calpena Eduardo E Wilkie Andrew O M AOM Willems Marjolaine M Crowley William F WF Balasubramanian Ravikumar R Lamarche-Vane Nathalie N Davis Erica E EE Seminara Stephanie B SB
Genetics in medicine : official journal of the American College of Medical Genetics 20220930 12
<h4>Purpose</h4>The study aimed to identify novel genes for idiopathic hypogonadotropic hypogonadism (IHH).<h4>Methods</h4>A cohort of 1387 probands with IHH underwent exome sequencing and de novo, familial, and cohort-wide investigations. Functional studies were performed on 2 p190 Rho GTPase-activating proteins (p190 RhoGAP), ARHGAP35 and ARHGAP5, which involved in vivo modeling in larval zebrafish and an in vitro p190A-GAP activity assay.<h4>Results</h4>Rare protein-truncating variants (PTVs; ...[more]