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Rapid character scoring and tabulation of large leaf-image libraries using Adobe Bridge.


ABSTRACT:

Premise

Digital image libraries are an integral part of specimen-based research. However, coding and extracting metadata for hundreds of specimens on a personal computer can be complex. In addition, most existing workflows require downsampling or platform switching and do not link character data directly to the images.

Methods and results

We demonstrate a method to code and embed into images the standard leaf architecture and insect-damage characters that are widely used in paleobotany. Using the visual file browser Adobe Bridge, customizable and searchable keywords can be applied directly and reversibly to individual full-resolution images, and the data can be extracted and formatted into a matrix using scripts.

Conclusions

Our approach is intuitive and acts as a digital mimic and complement to the experience of sorting and analyzing specimens in-person. Keywords can be easily customized for other data types that require visual sorting using image libraries.

SUBMITTER: Rossetto-Harris G 

PROVIDER: S-EPMC9742824 | biostudies-literature | 2022 Nov-Dec

REPOSITORIES: biostudies-literature

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Publications

Rapid character scoring and tabulation of large leaf-image libraries using Adobe Bridge.

Rossetto-Harris Gabriella G   Stiles Elena E   Wilf Peter P   Donovan Michael P MP   Zou Xiaoyu X  

Applications in plant sciences 20221124 6


<h4>Premise</h4>Digital image libraries are an integral part of specimen-based research. However, coding and extracting metadata for hundreds of specimens on a personal computer can be complex. In addition, most existing workflows require downsampling or platform switching and do not link character data directly to the images.<h4>Methods and results</h4>We demonstrate a method to code and embed into images the standard leaf architecture and insect-damage characters that are widely used in paleob  ...[more]

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