Ontology highlight
ABSTRACT: Premise
Digital image libraries are an integral part of specimen-based research. However, coding and extracting metadata for hundreds of specimens on a personal computer can be complex. In addition, most existing workflows require downsampling or platform switching and do not link character data directly to the images.Methods and results
We demonstrate a method to code and embed into images the standard leaf architecture and insect-damage characters that are widely used in paleobotany. Using the visual file browser Adobe Bridge, customizable and searchable keywords can be applied directly and reversibly to individual full-resolution images, and the data can be extracted and formatted into a matrix using scripts.Conclusions
Our approach is intuitive and acts as a digital mimic and complement to the experience of sorting and analyzing specimens in-person. Keywords can be easily customized for other data types that require visual sorting using image libraries.
SUBMITTER: Rossetto-Harris G
PROVIDER: S-EPMC9742824 | biostudies-literature | 2022 Nov-Dec
REPOSITORIES: biostudies-literature

Rossetto-Harris Gabriella G Stiles Elena E Wilf Peter P Donovan Michael P MP Zou Xiaoyu X
Applications in plant sciences 20221124 6
<h4>Premise</h4>Digital image libraries are an integral part of specimen-based research. However, coding and extracting metadata for hundreds of specimens on a personal computer can be complex. In addition, most existing workflows require downsampling or platform switching and do not link character data directly to the images.<h4>Methods and results</h4>We demonstrate a method to code and embed into images the standard leaf architecture and insect-damage characters that are widely used in paleob ...[more]