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Structural basis of lysophosphatidylserine receptor GPR174 ligand recognition and activation.


ABSTRACT: Lysophosphatidylserine (LysoPS) is a lipid mediator that induces multiple cellular responses through binding to GPR174. Here, we present the cryo-electron microscopy (cryo-EM) structure of LysoPS-bound human GPR174 in complex with Gs protein. The structure reveals a ligand recognition mode, including the negatively charged head group of LysoPS forms extensive polar interactions with surrounding key residues of the ligand binding pocket, and the L-serine moiety buries deeply into a positive charged cavity in the pocket. In addition, the structure unveils a partially open pocket on transmembrane domain helix (TM) 4 and 5 for a lateral entry of ligand. Finally, the structure reveals a Gs engaging mode featured by a deep insertion of a helix 5 (αH5) and extensive polar interactions between receptor and αH5. Taken together, the information revealed by our structural study provides a framework for understanding LysoPS signaling and a rational basis for designing LysoPS receptor-targeting drugs.

SUBMITTER: Liang J 

PROVIDER: S-EPMC9950150 | biostudies-literature | 2023 Feb

REPOSITORIES: biostudies-literature

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Structural basis of lysophosphatidylserine receptor GPR174 ligand recognition and activation.

Liang Jiale J   Inoue Asuka A   Ikuta Tatsuya T   Xia Ruixue R   Wang Na N   Kawakami Kouki K   Xu Zhenmei Z   Qian Yu Y   Zhu Xinyan X   Zhang Anqi A   Guo Changyou C   Huang Zhiwei Z   He Yuanzheng Y  

Nature communications 20230223 1


Lysophosphatidylserine (LysoPS) is a lipid mediator that induces multiple cellular responses through binding to GPR174. Here, we present the cryo-electron microscopy (cryo-EM) structure of LysoPS-bound human GPR174 in complex with G<sub>s</sub> protein. The structure reveals a ligand recognition mode, including the negatively charged head group of LysoPS forms extensive polar interactions with surrounding key residues of the ligand binding pocket, and the L-serine moiety buries deeply into a pos  ...[more]

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