Genomics

Dataset Information

0

Age-dependent increase of oxidative stress regulates microRNA-29 family preserving cardiac health


ABSTRACT: The short-lived turquoise killifish Nothobranchius furzeri (Nfu) is a valid model for aging studies. Here, we investigated its age-associated cardiac function. We observed oxidative stress accumulation and an engagement of microRNAs (miRNAs) in the aging heart. MiRNA-sequencing of 5 week (young), 12-21 week (adult) and 28-40 week (old) Nfu hearts revealed 23 up-regulated and 18 down-regulated miRNAs with age. MiR-29 family turned out as one of the most up-regulated miRNAs during aging. MiR-29 family increase induces a decrease of known targets like collagens and DNA methyl transferases (DNMTs) paralleled by 5´methyl-cytosine (5mC) level decrease. To further investigate miR-29 family role in the fish heart we generated a transgenic zebrafish model where miR-29 was knocked-down. In this model we found significant morphological and functional cardiac alterations and an impairment of oxygen dependent pathways by transcriptome analysis leading to hypoxic marker up-regulation. To get insights the possible hypoxic regulation of miR-29 family, we exposed human cardiac fibroblasts to 1% O2 levels. In hypoxic condition we found miR-29 down-modulation responsible for the accumulation of collagens and 5mC. Overall, our data suggest that miR-29 family up-regulation might represent an endogenous mechanism aimed at ameliorating the age-dependent cardiac damage leading to hypertrophy and fibrosis.

ORGANISM(S): Danio rerio

PROVIDER: GSE107003 | GEO | 2018/02/27

REPOSITORIES: GEO

Similar Datasets

2020-07-14 | GSE135032 | GEO
2019-12-02 | GSE135129 | GEO
2023-11-21 | GSE241423 | GEO
2010-03-01 | GSE18651 | GEO
2023-05-16 | GSE218946 | GEO
2020-11-20 | GSE161832 | GEO
2019-01-23 | GSE65704 | GEO
2022-12-06 | GSE107763 | GEO
2013-01-04 | GSE27430 | GEO
2015-09-01 | GSE66038 | GEO